Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SRP9P49458 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SRP9P49458 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SRP9P49458 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.95□□□□□ -0.34
SRP9P49458 KRT8P14-201ENST00000414254 1442 ntBASIC12.95□□□□□ -0.34
SRP9P49458 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
SRP9P49458 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.95□□□□□ -0.34
SRP9P49458 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SRP9P49458 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SRP9P49458 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SRP9P49458 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SRP9P49458 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC12.94□□□□□ -0.34
SRP9P49458 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SRP9P49458 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SRP9P49458 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.94□□□□□ -0.34
SRP9P49458 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.94□□□□□ -0.34
SRP9P49458 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SRP9P49458 TCAM1P-207ENST00000485295 1537 ntBASIC12.94□□□□□ -0.34
SRP9P49458 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.94□□□□□ -0.34
SRP9P49458 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SRP9P49458 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SRP9P49458 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SRP9P49458 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SRP9P49458 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SRP9P49458 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SRP9P49458 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SRP9P49458 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SRP9P49458 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SRP9P49458 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SRP9P49458 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SRP9P49458 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.94□□□□□ -0.34
SRP9P49458 ACTBP8-201ENST00000403258 1108 ntBASIC12.94□□□□□ -0.34
SRP9P49458 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.94□□□□□ -0.34
SRP9P49458 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.94□□□□□ -0.34
SRP9P49458 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.94□□□□□ -0.34
SRP9P49458 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.94□□□□□ -0.34
SRP9P49458 AC022616.1-201ENST00000518688 554 ntBASIC12.94□□□□□ -0.34
SRP9P49458 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SRP9P49458 FUZ-207ENST00000526575 482 ntTSL 4 BASIC12.94□□□□□ -0.34
SRP9P49458 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SRP9P49458 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.94□□□□□ -0.34
SRP9P49458 AC132938.2-201ENST00000579188 680 ntBASIC12.94□□□□□ -0.34
SRP9P49458 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC12.94□□□□□ -0.34
SRP9P49458 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC12.94□□□□□ -0.34
SRP9P49458 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SRP9P49458 AL591163.1-201ENST00000641757 987 ntBASIC12.94□□□□□ -0.34
SRP9P49458 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.94□□□□□ -0.34
SRP9P49458 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SRP9P49458 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SRP9P49458 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SRP9P49458 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
SRP9P49458 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SRP9P49458 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
SRP9P49458 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
SRP9P49458 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.94□□□□□ -0.34
SRP9P49458 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.94□□□□□ -0.34
SRP9P49458 MEX3B-202ENST00000558133 4333 ntBASIC12.94□□□□□ -0.34
SRP9P49458 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SRP9P49458 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SRP9P49458 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SRP9P49458 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
SRP9P49458 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.94□□□□□ -0.34
SRP9P49458 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.93□□□□□ -0.34
SRP9P49458 PCDHB18P-202ENST00000526308 3197 ntBASIC12.93□□□□□ -0.34
SRP9P49458 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SRP9P49458 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SRP9P49458 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SRP9P49458 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC12.93□□□□□ -0.34
SRP9P49458 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SRP9P49458 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.93□□□□□ -0.34
SRP9P49458 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
SRP9P49458 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
SRP9P49458 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SRP9P49458 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SRP9P49458 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.93□□□□□ -0.34
SRP9P49458 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
SRP9P49458 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SRP9P49458 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SRP9P49458 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SRP9P49458 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
SRP9P49458 AC020910.6-201ENST00000623084 1459 ntBASIC12.93□□□□□ -0.34
SRP9P49458 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SRP9P49458 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SRP9P49458 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SRP9P49458 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.93□□□□□ -0.34
SRP9P49458 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
SRP9P49458 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
SRP9P49458 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SRP9P49458 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
SRP9P49458 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SRP9P49458 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SRP9P49458 KRT43P-201ENST00000434019 910 ntBASIC12.93□□□□□ -0.34
SRP9P49458 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SRP9P49458 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SRP9P49458 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.93□□□□□ -0.34
SRP9P49458 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SRP9P49458 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC12.93□□□□□ -0.34
SRP9P49458 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.93□□□□□ -0.34
SRP9P49458 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
SRP9P49458 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms