Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A1P43005 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A1P43005 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A1P43005 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC1A1P43005 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A1P43005 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A1P43005 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC1A1P43005 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC1A1P43005 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC1A1P43005 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SLC1A1P43005 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC1A1P43005 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC1A1P43005 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SLC1A1P43005 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A1P43005 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SLC1A1P43005 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC1A1P43005 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A1P43005 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SLC1A1P43005 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A1P43005 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SLC1A1P43005 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC1A1P43005 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A1P43005 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SLC1A1P43005 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC1A1P43005 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SLC1A1P43005 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A1P43005 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC1A1P43005 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A1P43005 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A1P43005 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A1P43005 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A1P43005 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A1P43005 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A1P43005 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.15■□□□□ 0.02
SLC1A1P43005 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A1P43005 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC1A1P43005 AK2P2-201ENST00000439142 405 ntBASIC15.15■□□□□ 0.02
SLC1A1P43005 HIST2H2BB-201ENST00000449108 381 ntBASIC15.15■□□□□ 0.02
SLC1A1P43005 HOMER2P2-201ENST00000451621 847 ntBASIC15.15■□□□□ 0.02
SLC1A1P43005 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A1P43005 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A1P43005 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC1A1P43005 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC1A1P43005 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A1P43005 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC1A1P43005 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.15■□□□□ 0.02
SLC1A1P43005 PAM16-211ENST00000575848 518 ntTSL 3 BASIC15.15■□□□□ 0.02
SLC1A1P43005 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SLC1A1P43005 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC1A1P43005 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.15■□□□□ 0.02
SLC1A1P43005 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC1A1P43005 MIR6720-201ENST00000611664 98 ntBASIC15.15■□□□□ 0.02
SLC1A1P43005 IGHV3-72-202ENST00000621503 303 ntBASIC15.15■□□□□ 0.02
SLC1A1P43005 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC1A1P43005 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.15■□□□□ 0.02
SLC1A1P43005 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SLC1A1P43005 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A1P43005 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A1P43005 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
SLC1A1P43005 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC1A1P43005 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A1P43005 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A1P43005 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A1P43005 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A1P43005 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A1P43005 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SLC1A1P43005 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A1P43005 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC1A1P43005 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A1P43005 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A1P43005 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A1P43005 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A1P43005 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC1A1P43005 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A1P43005 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A1P43005 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A1P43005 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A1P43005 AC087386.2-201ENST00000623212 4637 ntBASIC15.14■□□□□ 0.01
SLC1A1P43005 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A1P43005 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
SLC1A1P43005 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A1P43005 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A1P43005 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC1A1P43005 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A1P43005 AC138969.2-201ENST00000532739 9932 ntBASIC15.14■□□□□ 0.01
SLC1A1P43005 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC1A1P43005 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.14■□□□□ 0.01
SLC1A1P43005 KRT18P15-201ENST00000458108 1291 ntBASIC15.14■□□□□ 0.01
SLC1A1P43005 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A1P43005 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A1P43005 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.14■□□□□ 0.01
SLC1A1P43005 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.14■□□□□ 0.01
SLC1A1P43005 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A1P43005 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.14■□□□□ 0.01
SLC1A1P43005 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SLC1A1P43005 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC1A1P43005 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC1A1P43005 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A1P43005 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC1A1P43005 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms