Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
MDH1P40925 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MDH1P40925 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
MDH1P40925 KRT18P3-201ENST00000451602 1288 ntBASIC14.55□□□□□ -0.08
MDH1P40925 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.55□□□□□ -0.08
MDH1P40925 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.55□□□□□ -0.08
MDH1P40925 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.55□□□□□ -0.08
MDH1P40925 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.55□□□□□ -0.08
MDH1P40925 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.55□□□□□ -0.08
MDH1P40925 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.55□□□□□ -0.08
MDH1P40925 AC107373.2-201ENST00000607735 490 ntBASIC14.55□□□□□ -0.08
MDH1P40925 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.55□□□□□ -0.08
MDH1P40925 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
MDH1P40925 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.55□□□□□ -0.08
MDH1P40925 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
MDH1P40925 AL138725.1-201ENST00000407347 1314 ntBASIC14.55□□□□□ -0.08
MDH1P40925 FAM90A11P-201ENST00000518378 2218 ntBASIC14.55□□□□□ -0.08
MDH1P40925 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MDH1P40925 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.55□□□□□ -0.08
MDH1P40925 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.55□□□□□ -0.08
MDH1P40925 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
MDH1P40925 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
MDH1P40925 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
MDH1P40925 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
MDH1P40925 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
MDH1P40925 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
MDH1P40925 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC14.55□□□□□ -0.08
MDH1P40925 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC14.55□□□□□ -0.08
MDH1P40925 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
MDH1P40925 AC002350.2-201ENST00000623894 1828 ntBASIC14.55□□□□□ -0.08
MDH1P40925 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MDH1P40925 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MDH1P40925 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MDH1P40925 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MDH1P40925 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MDH1P40925 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MDH1P40925 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC14.54□□□□□ -0.08
MDH1P40925 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MDH1P40925 AC022364.1-202ENST00000617468 2409 ntBASIC14.54□□□□□ -0.08
MDH1P40925 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MDH1P40925 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
MDH1P40925 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC14.54□□□□□ -0.08
MDH1P40925 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC14.54□□□□□ -0.08
MDH1P40925 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MDH1P40925 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
MDH1P40925 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MDH1P40925 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MDH1P40925 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MDH1P40925 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.54□□□□□ -0.08
MDH1P40925 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.54□□□□□ -0.08
MDH1P40925 RPL37AP1-201ENST00000412502 279 ntBASIC14.54□□□□□ -0.08
MDH1P40925 AL161932.2-201ENST00000435436 679 ntBASIC14.54□□□□□ -0.08
MDH1P40925 ACTG1P14-201ENST00000446382 1122 ntBASIC14.54□□□□□ -0.08
MDH1P40925 RNA5SP416-201ENST00000516838 111 ntBASIC14.54□□□□□ -0.08
MDH1P40925 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.54□□□□□ -0.08
MDH1P40925 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.54□□□□□ -0.08
MDH1P40925 AL512361.1-201ENST00000554200 418 ntBASIC14.54□□□□□ -0.08
MDH1P40925 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.54□□□□□ -0.08
MDH1P40925 JPT2-214ENST00000569765 782 ntTSL 2 BASIC14.54□□□□□ -0.08
MDH1P40925 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MDH1P40925 AC104506.1-201ENST00000609247 429 ntBASIC14.54□□□□□ -0.08
MDH1P40925 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.54□□□□□ -0.08
MDH1P40925 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MDH1P40925 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MDH1P40925 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MDH1P40925 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MDH1P40925 AL590440.2-201ENST00000641973 1595 ntBASIC14.54□□□□□ -0.08
MDH1P40925 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
MDH1P40925 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC14.54□□□□□ -0.08
MDH1P40925 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
MDH1P40925 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MDH1P40925 NPTN-IT1-201ENST00000628401 2283 ntBASIC14.54□□□□□ -0.08
MDH1P40925 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MDH1P40925 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
MDH1P40925 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
MDH1P40925 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC14.54□□□□□ -0.08
MDH1P40925 TRIM80P-201ENST00000455685 2848 ntBASIC14.54□□□□□ -0.08
MDH1P40925 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
MDH1P40925 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MDH1P40925 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC14.54□□□□□ -0.08
MDH1P40925 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MDH1P40925 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
MDH1P40925 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MDH1P40925 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
MDH1P40925 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MDH1P40925 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MDH1P40925 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MDH1P40925 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC14.53□□□□□ -0.08
MDH1P40925 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC14.53□□□□□ -0.08
MDH1P40925 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
MDH1P40925 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
MDH1P40925 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
MDH1P40925 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MDH1P40925 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MDH1P40925 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MDH1P40925 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.53□□□□□ -0.08
MDH1P40925 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
MDH1P40925 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
MDH1P40925 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.53□□□□□ -0.08
MDH1P40925 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms