Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 RNU1-114P-201ENST00000365297 166 ntBASIC12.75□□□□□ -0.37
RAB3BP20337 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.75□□□□□ -0.37
RAB3BP20337 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB3BP20337 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB3BP20337 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB3BP20337 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC12.75□□□□□ -0.37
RAB3BP20337 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.75□□□□□ -0.37
RAB3BP20337 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB3BP20337 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.75□□□□□ -0.37
RAB3BP20337 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB3BP20337 FDX1P1-201ENST00000449115 551 ntBASIC12.75□□□□□ -0.37
RAB3BP20337 AC114812.1-204ENST00000449669 728 ntBASIC12.75□□□□□ -0.37
RAB3BP20337 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.75□□□□□ -0.37
RAB3BP20337 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
RAB3BP20337 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
RAB3BP20337 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
RAB3BP20337 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB3BP20337 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
RAB3BP20337 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.75□□□□□ -0.37
RAB3BP20337 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.75□□□□□ -0.37
RAB3BP20337 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.75□□□□□ -0.37
RAB3BP20337 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.75□□□□□ -0.37
RAB3BP20337 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB3BP20337 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC12.75□□□□□ -0.37
RAB3BP20337 SSH2-210ENST00000582084 560 ntTSL 3 BASIC12.75□□□□□ -0.37
RAB3BP20337 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.75□□□□□ -0.37
RAB3BP20337 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB3BP20337 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.75□□□□□ -0.37
RAB3BP20337 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.75□□□□□ -0.37
RAB3BP20337 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.75□□□□□ -0.37
RAB3BP20337 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC12.75□□□□□ -0.37
RAB3BP20337 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.75□□□□□ -0.37
RAB3BP20337 AP001002.3-201ENST00000623482 206 ntBASIC12.75□□□□□ -0.37
RAB3BP20337 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
RAB3BP20337 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.75□□□□□ -0.37
RAB3BP20337 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB3BP20337 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB3BP20337 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB3BP20337 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB3BP20337 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB3BP20337 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB3BP20337 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB3BP20337 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC12.75□□□□□ -0.37
RAB3BP20337 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB3BP20337 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB3BP20337 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB3BP20337 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
RAB3BP20337 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
RAB3BP20337 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
RAB3BP20337 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.74□□□□□ -0.37
RAB3BP20337 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB3BP20337 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
RAB3BP20337 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
RAB3BP20337 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RAB3BP20337 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB3BP20337 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RAB3BP20337 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB3BP20337 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
RAB3BP20337 MARK2P9-201ENST00000430958 1727 ntBASIC12.74□□□□□ -0.37
RAB3BP20337 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB3BP20337 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RAB3BP20337 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RAB3BP20337 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB3BP20337 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB3BP20337 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RAB3BP20337 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB3BP20337 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
RAB3BP20337 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
RAB3BP20337 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RAB3BP20337 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB3BP20337 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB3BP20337 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB3BP20337 AC064801.2-201ENST00000625052 1303 ntBASIC12.74□□□□□ -0.37
RAB3BP20337 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
RAB3BP20337 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB3BP20337 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RAB3BP20337 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB3BP20337 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RAB3BP20337 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.74□□□□□ -0.37
RAB3BP20337 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC12.74□□□□□ -0.37
RAB3BP20337 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.74□□□□□ -0.37
RAB3BP20337 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC12.74□□□□□ -0.37
RAB3BP20337 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB3BP20337 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.74□□□□□ -0.37
RAB3BP20337 POLD2P1-201ENST00000511220 997 ntBASIC12.74□□□□□ -0.37
RAB3BP20337 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.74□□□□□ -0.37
RAB3BP20337 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC12.74□□□□□ -0.37
RAB3BP20337 AC027369.6-201ENST00000525520 931 ntBASIC12.74□□□□□ -0.37
RAB3BP20337 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
RAB3BP20337 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.74□□□□□ -0.37
RAB3BP20337 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC12.74□□□□□ -0.37
RAB3BP20337 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC12.74□□□□□ -0.37
RAB3BP20337 AL844908.2-201ENST00000609461 460 ntBASIC12.74□□□□□ -0.37
RAB3BP20337 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC12.74□□□□□ -0.37
RAB3BP20337 BAP1-211ENST00000615113 489 ntBASIC12.74□□□□□ -0.37
RAB3BP20337 AC007431.3-201ENST00000623221 587 ntBASIC12.74□□□□□ -0.37
RAB3BP20337 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
RAB3BP20337 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB3BP20337 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
RAB3BP20337 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms