Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HOXD8P13378 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
HOXD8P13378 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HOXD8P13378 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
HOXD8P13378 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC15.69■□□□□ 0.1
HOXD8P13378 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC15.69■□□□□ 0.1
HOXD8P13378 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXD8P13378 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXD8P13378 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC15.69■□□□□ 0.1
HOXD8P13378 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
HOXD8P13378 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HOXD8P13378 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXD8P13378 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXD8P13378 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXD8P13378 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
HOXD8P13378 RPL3P2-204ENST00000413027 1203 ntBASIC15.69■□□□□ 0.1
HOXD8P13378 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC15.69■□□□□ 0.1
HOXD8P13378 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HOXD8P13378 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC15.69■□□□□ 0.1
HOXD8P13378 RN7SL375P-201ENST00000492442 298 ntBASIC15.69■□□□□ 0.1
HOXD8P13378 REEP5-205ENST00000504247 480 ntTSL 5 BASIC15.69■□□□□ 0.1
HOXD8P13378 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC15.69■□□□□ 0.1
HOXD8P13378 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC15.69■□□□□ 0.1
HOXD8P13378 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HOXD8P13378 AC132825.4-202ENST00000578792 434 ntBASIC15.69■□□□□ 0.1
HOXD8P13378 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HOXD8P13378 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
HOXD8P13378 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
HOXD8P13378 AC011471.3-201ENST00000623576 402 ntBASIC15.69■□□□□ 0.1
HOXD8P13378 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
HOXD8P13378 FUCA1P1-201ENST00000374476 1351 ntBASIC15.69■□□□□ 0.1
HOXD8P13378 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC15.69■□□□□ 0.1
HOXD8P13378 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HOXD8P13378 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXD8P13378 AC004554.1-201ENST00000422830 1468 ntBASIC15.69■□□□□ 0.1
HOXD8P13378 AL672207.1-201ENST00000328462 1570 ntBASIC15.69■□□□□ 0.1
HOXD8P13378 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HOXD8P13378 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXD8P13378 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXD8P13378 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HOXD8P13378 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXD8P13378 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXD8P13378 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
HOXD8P13378 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXD8P13378 TUBB8P4-201ENST00000511806 1324 ntBASIC15.68■□□□□ 0.1
HOXD8P13378 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC15.68■□□□□ 0.1
HOXD8P13378 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
HOXD8P13378 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXD8P13378 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXD8P13378 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXD8P13378 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
HOXD8P13378 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXD8P13378 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXD8P13378 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HOXD8P13378 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
HOXD8P13378 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.68■□□□□ 0.1
HOXD8P13378 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.68■□□□□ 0.1
HOXD8P13378 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
HOXD8P13378 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC15.68■□□□□ 0.1
HOXD8P13378 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXD8P13378 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
HOXD8P13378 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC15.68■□□□□ 0.1
HOXD8P13378 AC108734.2-201ENST00000420887 1069 ntBASIC15.68■□□□□ 0.1
HOXD8P13378 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXD8P13378 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC15.68■□□□□ 0.1
HOXD8P13378 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC15.68■□□□□ 0.1
HOXD8P13378 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC15.68■□□□□ 0.1
HOXD8P13378 AC141586.1-203ENST00000567242 366 ntBASIC15.68■□□□□ 0.1
HOXD8P13378 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
HOXD8P13378 AC073592.2-201ENST00000623062 780 ntBASIC15.68■□□□□ 0.1
HOXD8P13378 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC15.68■□□□□ 0.1
HOXD8P13378 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC15.68■□□□□ 0.1
HOXD8P13378 AC002472.4-201ENST00000641915 272 ntBASIC15.68■□□□□ 0.1
HOXD8P13378 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HOXD8P13378 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXD8P13378 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXD8P13378 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.68■□□□□ 0.1
HOXD8P13378 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
HOXD8P13378 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXD8P13378 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HOXD8P13378 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HOXD8P13378 AL590824.1-201ENST00000403828 1349 ntBASIC15.68■□□□□ 0.1
HOXD8P13378 CTBP2P8-201ENST00000422584 1330 ntBASIC15.68■□□□□ 0.1
HOXD8P13378 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC15.68■□□□□ 0.1
HOXD8P13378 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HOXD8P13378 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
HOXD8P13378 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.67■□□□□ 0.1
HOXD8P13378 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC15.67■□□□□ 0.1
HOXD8P13378 GOLGA8UP-201ENST00000527159 1755 ntBASIC15.67■□□□□ 0.1
HOXD8P13378 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HOXD8P13378 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
HOXD8P13378 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC15.67■□□□□ 0.1
HOXD8P13378 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HOXD8P13378 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HOXD8P13378 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HOXD8P13378 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.67■□□□□ 0.1
HOXD8P13378 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HOXD8P13378 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HOXD8P13378 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.67■□□□□ 0.1
HOXD8P13378 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms