Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 KRT18P46-201ENST00000435568 1279 ntBASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 MAX-218ENST00000557746 571 ntTSL 4 BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 AL139339.2-201ENST00000608063 657 ntBASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 AC007950.2-201ENST00000615045 2347 ntBASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 LINC00115-201ENST00000473798 1317 ntBASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 MYO15B-237ENST00000642007 4893 ntBASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 FUCA1P1-201ENST00000374476 1351 ntBASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 PARN-202ENST00000420015 2360 ntTSL 2 BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 MIR566-201ENST00000385187 94 ntBASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 BX679664.3-201ENST00000414070 555 ntBASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 RN7SL788P-201ENST00000460504 316 ntBASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 AC113935.1-201ENST00000471722 555 ntBASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 CHCHD2P2-201ENST00000503744 321 ntBASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 AC013553.1-201ENST00000560906 267 ntBASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 AC148477.9-201ENST00000623974 539 ntBASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 MX1-218ENST00000619682 1980 ntTSL 5 BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 DBET-201ENST00000630918 3363 ntBASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CSB-PGBD3P0DP91 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC18.94■□□□□ 0.62
CSB-PGBD3P0DP91 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSB-PGBD3P0DP91 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC18.94■□□□□ 0.62
CSB-PGBD3P0DP91 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
CSB-PGBD3P0DP91 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.94■□□□□ 0.62
CSB-PGBD3P0DP91 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CSB-PGBD3P0DP91 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CSB-PGBD3P0DP91 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSB-PGBD3P0DP91 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CSB-PGBD3P0DP91 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms