Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 AL590824.1-201ENST00000403828 1349 ntBASIC16.12■□□□□ 0.17
CYP3A4P08684 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CYP3A4P08684 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CYP3A4P08684 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CYP3A4P08684 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CYP3A4P08684 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CYP3A4P08684 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CYP3A4P08684 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CYP3A4P08684 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYP3A4P08684 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYP3A4P08684 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.11■□□□□ 0.17
CYP3A4P08684 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYP3A4P08684 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYP3A4P08684 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYP3A4P08684 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYP3A4P08684 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYP3A4P08684 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CYP3A4P08684 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYP3A4P08684 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CYP3A4P08684 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYP3A4P08684 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYP3A4P08684 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.11■□□□□ 0.17
CYP3A4P08684 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYP3A4P08684 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
CYP3A4P08684 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CYP3A4P08684 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYP3A4P08684 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CYP3A4P08684 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CYP3A4P08684 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYP3A4P08684 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CYP3A4P08684 NDUFS6P1-201ENST00000485187 316 ntBASIC16.11■□□□□ 0.17
CYP3A4P08684 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CYP3A4P08684 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYP3A4P08684 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC16.11■□□□□ 0.17
CYP3A4P08684 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC16.11■□□□□ 0.17
CYP3A4P08684 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.11■□□□□ 0.17
CYP3A4P08684 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC16.11■□□□□ 0.17
CYP3A4P08684 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.11■□□□□ 0.17
CYP3A4P08684 AL133467.4-201ENST00000602953 725 ntBASIC16.11■□□□□ 0.17
CYP3A4P08684 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.11■□□□□ 0.17
CYP3A4P08684 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYP3A4P08684 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYP3A4P08684 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC16.11■□□□□ 0.17
CYP3A4P08684 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.11■□□□□ 0.17
CYP3A4P08684 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYP3A4P08684 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYP3A4P08684 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC16.11■□□□□ 0.17
CYP3A4P08684 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYP3A4P08684 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CYP3A4P08684 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYP3A4P08684 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.11■□□□□ 0.17
CYP3A4P08684 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYP3A4P08684 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYP3A4P08684 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYP3A4P08684 USP39-207ENST00000450066 2086 ntTSL 2 BASIC16.1■□□□□ 0.17
CYP3A4P08684 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CYP3A4P08684 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
CYP3A4P08684 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CYP3A4P08684 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CYP3A4P08684 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CYP3A4P08684 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
CYP3A4P08684 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
CYP3A4P08684 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CYP3A4P08684 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CYP3A4P08684 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CYP3A4P08684 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CYP3A4P08684 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CYP3A4P08684 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.1■□□□□ 0.17
CYP3A4P08684 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CYP3A4P08684 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC16.1■□□□□ 0.17
CYP3A4P08684 MAGEA5-201ENST00000446757 942 ntBASIC16.1■□□□□ 0.17
CYP3A4P08684 EEF1DP6-201ENST00000449232 372 ntBASIC16.1■□□□□ 0.17
CYP3A4P08684 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.1■□□□□ 0.17
CYP3A4P08684 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CYP3A4P08684 IGLV3-15-201ENST00000518356 244 ntBASIC16.1■□□□□ 0.17
CYP3A4P08684 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CYP3A4P08684 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC16.1■□□□□ 0.17
CYP3A4P08684 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.1■□□□□ 0.17
CYP3A4P08684 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC16.1■□□□□ 0.17
CYP3A4P08684 AC051619.9-201ENST00000623237 597 ntBASIC16.1■□□□□ 0.17
CYP3A4P08684 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CYP3A4P08684 CMC2-224ENST00000630396 481 ntTSL 5 BASIC16.1■□□□□ 0.17
CYP3A4P08684 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CYP3A4P08684 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CYP3A4P08684 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CYP3A4P08684 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CYP3A4P08684 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC16.1■□□□□ 0.17
CYP3A4P08684 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CYP3A4P08684 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
CYP3A4P08684 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC16.1■□□□□ 0.17
CYP3A4P08684 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CYP3A4P08684 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CYP3A4P08684 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CYP3A4P08684 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CYP3A4P08684 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CYP3A4P08684 DUT-208ENST00000559540 1441 ntTSL 2 BASIC16.1■□□□□ 0.17
CYP3A4P08684 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CYP3A4P08684 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CYP3A4P08684 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CYP3A4P08684 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms