Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL5A2P05997 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
COL5A2P05997 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.43■□□□□ 0.54
COL5A2P05997 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
COL5A2P05997 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL5A2P05997 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL5A2P05997 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL5A2P05997 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.43■□□□□ 0.54
COL5A2P05997 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC18.43■□□□□ 0.54
COL5A2P05997 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC18.43■□□□□ 0.54
COL5A2P05997 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL5A2P05997 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
COL5A2P05997 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL5A2P05997 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC18.43■□□□□ 0.54
COL5A2P05997 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL5A2P05997 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL5A2P05997 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
COL5A2P05997 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC18.43■□□□□ 0.54
COL5A2P05997 AL121949.3-201ENST00000406684 385 ntBASIC18.43■□□□□ 0.54
COL5A2P05997 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC18.43■□□□□ 0.54
COL5A2P05997 AL773545.2-201ENST00000442149 472 ntBASIC18.43■□□□□ 0.54
COL5A2P05997 AC010900.1-201ENST00000449849 1296 ntBASIC18.43■□□□□ 0.54
COL5A2P05997 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC18.43■□□□□ 0.54
COL5A2P05997 RN7SL523P-201ENST00000484401 298 ntBASIC18.43■□□□□ 0.54
COL5A2P05997 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC18.43■□□□□ 0.54
COL5A2P05997 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC18.43■□□□□ 0.54
COL5A2P05997 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC18.43■□□□□ 0.54
COL5A2P05997 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL5A2P05997 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC18.43■□□□□ 0.54
COL5A2P05997 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL5A2P05997 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC18.43■□□□□ 0.54
COL5A2P05997 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL5A2P05997 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
COL5A2P05997 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC18.43■□□□□ 0.54
COL5A2P05997 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL5A2P05997 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL5A2P05997 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL5A2P05997 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL5A2P05997 AC064850.1-201ENST00000413279 1398 ntBASIC18.43■□□□□ 0.54
COL5A2P05997 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL5A2P05997 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL5A2P05997 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC18.42■□□□□ 0.54
COL5A2P05997 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
COL5A2P05997 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC18.42■□□□□ 0.54
COL5A2P05997 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL5A2P05997 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL5A2P05997 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC18.42■□□□□ 0.54
COL5A2P05997 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL5A2P05997 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
COL5A2P05997 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL5A2P05997 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL5A2P05997 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL5A2P05997 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL5A2P05997 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL5A2P05997 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
COL5A2P05997 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC18.42■□□□□ 0.54
COL5A2P05997 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL5A2P05997 RPSAP70-201ENST00000504462 864 ntBASIC18.42■□□□□ 0.54
COL5A2P05997 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC18.42■□□□□ 0.54
COL5A2P05997 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC18.42■□□□□ 0.54
COL5A2P05997 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC18.42■□□□□ 0.54
COL5A2P05997 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL5A2P05997 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC18.42■□□□□ 0.54
COL5A2P05997 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC18.42■□□□□ 0.54
COL5A2P05997 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC18.42■□□□□ 0.54
COL5A2P05997 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC18.42■□□□□ 0.54
COL5A2P05997 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC18.42■□□□□ 0.54
COL5A2P05997 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC18.42■□□□□ 0.54
COL5A2P05997 AC004466.2-201ENST00000614749 516 ntBASIC18.42■□□□□ 0.54
COL5A2P05997 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
COL5A2P05997 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL5A2P05997 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL5A2P05997 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL5A2P05997 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
COL5A2P05997 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL5A2P05997 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL5A2P05997 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.42■□□□□ 0.54
COL5A2P05997 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
COL5A2P05997 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC18.42■□□□□ 0.54
COL5A2P05997 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL5A2P05997 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL5A2P05997 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC18.42■□□□□ 0.54
COL5A2P05997 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL5A2P05997 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL5A2P05997 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL5A2P05997 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC18.41■□□□□ 0.54
COL5A2P05997 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL5A2P05997 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL5A2P05997 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL5A2P05997 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
COL5A2P05997 MIR611-201ENST00000384869 67 ntBASIC18.41■□□□□ 0.54
COL5A2P05997 MPV17-209ENST00000405983 859 ntTSL 5 BASIC18.41■□□□□ 0.54
COL5A2P05997 AHCYP3-201ENST00000420053 1279 ntBASIC18.41■□□□□ 0.54
COL5A2P05997 AC010086.2-201ENST00000428616 226 ntBASIC18.41■□□□□ 0.54
COL5A2P05997 CCND3P1-201ENST00000438347 580 ntBASIC18.41■□□□□ 0.54
COL5A2P05997 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC18.41■□□□□ 0.54
COL5A2P05997 RHOQP2-201ENST00000449922 579 ntBASIC18.41■□□□□ 0.54
COL5A2P05997 RN7SL578P-201ENST00000477781 283 ntBASIC18.41■□□□□ 0.54
COL5A2P05997 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC18.41■□□□□ 0.54
COL5A2P05997 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms