Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC8.64□□□□□ -1.03
APOBP04114 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
APOBP04114 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
APOBP04114 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
APOBP04114 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC8.64□□□□□ -1.03
APOBP04114 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
APOBP04114 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
APOBP04114 WAC-202ENST00000347934 2839 ntTSL 5 BASIC8.63□□□□□ -1.03
APOBP04114 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
APOBP04114 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
APOBP04114 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC8.63□□□□□ -1.03
APOBP04114 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
APOBP04114 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC8.63□□□□□ -1.03
APOBP04114 RBM14-205ENST00000443702 732 ntTSL 3 BASIC8.63□□□□□ -1.03
APOBP04114 GULOP-201ENST00000454030 748 ntBASIC8.63□□□□□ -1.03
APOBP04114 PCTP-206ENST00000573500 919 ntTSL 3 BASIC8.63□□□□□ -1.03
APOBP04114 MIR4459-201ENST00000581837 66 ntBASIC8.63□□□□□ -1.03
APOBP04114 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC8.63□□□□□ -1.03
APOBP04114 AC132872.4-202ENST00000622924 2756 ntBASIC8.63□□□□□ -1.03
APOBP04114 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC8.63□□□□□ -1.03
APOBP04114 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
APOBP04114 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
APOBP04114 TP73-207ENST00000378290 1831 ntTSL 2 BASIC8.63□□□□□ -1.03
APOBP04114 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC8.63□□□□□ -1.03
APOBP04114 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
APOBP04114 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC8.63□□□□□ -1.03
APOBP04114 AC123912.6-201ENST00000612657 315 ntBASIC8.63□□□□□ -1.03
APOBP04114 CDIPT-AS1-203ENST00000638164 713 ntBASIC8.63□□□□□ -1.03
APOBP04114 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
APOBP04114 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
APOBP04114 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
APOBP04114 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
APOBP04114 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
APOBP04114 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
APOBP04114 AC089987.1-201ENST00000551654 2209 ntBASIC8.63□□□□□ -1.03
APOBP04114 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC8.63□□□□□ -1.03
APOBP04114 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC8.63□□□□□ -1.03
APOBP04114 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
APOBP04114 AC000078.1-201ENST00000420617 682 ntBASIC8.63□□□□□ -1.03
APOBP04114 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC8.63□□□□□ -1.03
APOBP04114 AF186996.6-201ENST00000485294 149 ntBASIC8.63□□□□□ -1.03
APOBP04114 AC112250.1-201ENST00000504640 745 ntBASIC8.63□□□□□ -1.03
APOBP04114 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC8.63□□□□□ -1.03
APOBP04114 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC8.63□□□□□ -1.03
APOBP04114 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC8.63□□□□□ -1.03
APOBP04114 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
APOBP04114 AC026150.1-201ENST00000562992 701 ntTSL 5 BASIC8.63□□□□□ -1.03
APOBP04114 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC8.63□□□□□ -1.03
APOBP04114 AL645940.1-201ENST00000606432 594 ntTSL 2 BASIC8.63□□□□□ -1.03
APOBP04114 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC8.63□□□□□ -1.03
APOBP04114 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
APOBP04114 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC8.63□□□□□ -1.03
APOBP04114 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
APOBP04114 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
APOBP04114 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
APOBP04114 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
APOBP04114 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
APOBP04114 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
APOBP04114 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
APOBP04114 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC8.63□□□□□ -1.03
APOBP04114 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
APOBP04114 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC8.63□□□□□ -1.03
APOBP04114 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
APOBP04114 AL513477.1-201ENST00000602865 2407 ntBASIC8.63□□□□□ -1.03
APOBP04114 AC006486.2-201ENST00000624246 2199 ntBASIC8.63□□□□□ -1.03
APOBP04114 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
APOBP04114 AC103592.1-201ENST00000394513 664 ntBASIC8.63□□□□□ -1.03
APOBP04114 AC012513.2-201ENST00000441511 1137 ntBASIC8.63□□□□□ -1.03
APOBP04114 AC105446.1-201ENST00000441882 407 ntTSL 3 BASIC8.63□□□□□ -1.03
APOBP04114 AC114812.4-201ENST00000506676 757 ntBASIC8.63□□□□□ -1.03
APOBP04114 COQ10BP2-201ENST00000513804 724 ntBASIC8.63□□□□□ -1.03
APOBP04114 AL139220.2-222ENST00000627999 756 ntTSL 5 BASIC8.63□□□□□ -1.03
APOBP04114 AC114296.1-202ENST00000638019 771 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
APOBP04114 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC8.63□□□□□ -1.03
APOBP04114 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
APOBP04114 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC8.62□□□□□ -1.03
APOBP04114 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC8.62□□□□□ -1.03
APOBP04114 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
APOBP04114 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
APOBP04114 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
APOBP04114 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
APOBP04114 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
APOBP04114 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
APOBP04114 ASS1P1-201ENST00000402854 1237 ntBASIC8.62□□□□□ -1.03
APOBP04114 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
APOBP04114 FAM27E3-201ENST00000418795 1593 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
APOBP04114 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC8.62□□□□□ -1.03
APOBP04114 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC8.62□□□□□ -1.03
APOBP04114 AC008267.3-201ENST00000448776 712 ntBASIC8.62□□□□□ -1.03
APOBP04114 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
APOBP04114 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC8.62□□□□□ -1.03
APOBP04114 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC8.62□□□□□ -1.03
APOBP04114 TIMM23-201ENST00000580018 1222 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
APOBP04114 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
APOBP04114 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
APOBP04114 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
APOBP04114 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
APOBP04114 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
APOBP04114 LILRP2-202ENST00000413572 1383 ntBASIC8.62□□□□□ -1.03
APOBP04114 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC8.62□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms