Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
TRGV3P03979 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
TRGV3P03979 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
TRGV3P03979 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TRGV3P03979 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TRGV3P03979 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
TRGV3P03979 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
TRGV3P03979 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
TRGV3P03979 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TRGV3P03979 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TRGV3P03979 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TRGV3P03979 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
TRGV3P03979 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC11.45□□□□□ -0.58
TRGV3P03979 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV3P03979 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV3P03979 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
TRGV3P03979 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
TRGV3P03979 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV3P03979 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
TRGV3P03979 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC11.45□□□□□ -0.58
TRGV3P03979 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV3P03979 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV3P03979 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC11.45□□□□□ -0.58
TRGV3P03979 AC015802.1-201ENST00000588104 1449 ntBASIC11.45□□□□□ -0.58
TRGV3P03979 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV3P03979 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
TRGV3P03979 KRT8P28-201ENST00000433288 1390 ntBASIC11.45□□□□□ -0.58
TRGV3P03979 PPP1R26P4-201ENST00000619065 3527 ntBASIC11.45□□□□□ -0.58
TRGV3P03979 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV3P03979 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV3P03979 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV3P03979 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV3P03979 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC11.45□□□□□ -0.58
TRGV3P03979 POLL-206ENST00000370172 2308 ntTSL 2 BASIC11.45□□□□□ -0.58
TRGV3P03979 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV3P03979 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV3P03979 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
TRGV3P03979 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
TRGV3P03979 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV3P03979 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC11.45□□□□□ -0.58
TRGV3P03979 AL354877.1-201ENST00000424412 413 ntBASIC11.45□□□□□ -0.58
TRGV3P03979 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC11.45□□□□□ -0.58
TRGV3P03979 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC11.45□□□□□ -0.58
TRGV3P03979 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
TRGV3P03979 FAM58BP-201ENST00000439056 645 ntBASIC11.45□□□□□ -0.58
TRGV3P03979 ATP6V0CP2-201ENST00000469409 207 ntBASIC11.45□□□□□ -0.58
TRGV3P03979 RPSAP36-202ENST00000494591 1261 ntBASIC11.45□□□□□ -0.58
TRGV3P03979 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV3P03979 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
TRGV3P03979 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC11.45□□□□□ -0.58
TRGV3P03979 FAM86HP-204ENST00000513466 959 ntBASIC11.45□□□□□ -0.58
TRGV3P03979 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC11.45□□□□□ -0.58
TRGV3P03979 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC11.45□□□□□ -0.58
TRGV3P03979 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV3P03979 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV3P03979 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC11.45□□□□□ -0.58
TRGV3P03979 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC11.45□□□□□ -0.58
TRGV3P03979 DERL2-202ENST00000570848 657 ntTSL 5 BASIC11.45□□□□□ -0.58
TRGV3P03979 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC11.45□□□□□ -0.58
TRGV3P03979 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC11.45□□□□□ -0.58
TRGV3P03979 RN7SL219P-201ENST00000582872 296 ntBASIC11.45□□□□□ -0.58
TRGV3P03979 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC11.45□□□□□ -0.58
TRGV3P03979 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC11.45□□□□□ -0.58
TRGV3P03979 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC11.45□□□□□ -0.58
TRGV3P03979 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV3P03979 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV3P03979 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC11.45□□□□□ -0.58
TRGV3P03979 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV3P03979 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV3P03979 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV3P03979 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC11.45□□□□□ -0.58
TRGV3P03979 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV3P03979 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV3P03979 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC11.45□□□□□ -0.58
TRGV3P03979 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV3P03979 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TRGV3P03979 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
TRGV3P03979 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
TRGV3P03979 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC11.44□□□□□ -0.58
TRGV3P03979 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TRGV3P03979 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TRGV3P03979 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
TRGV3P03979 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TRGV3P03979 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TRGV3P03979 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TRGV3P03979 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TRGV3P03979 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TRGV3P03979 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
TRGV3P03979 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TRGV3P03979 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TRGV3P03979 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TRGV3P03979 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TRGV3P03979 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TRGV3P03979 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC11.44□□□□□ -0.58
TRGV3P03979 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
TRGV3P03979 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TRGV3P03979 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TRGV3P03979 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC11.44□□□□□ -0.58
TRGV3P03979 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC11.44□□□□□ -0.58
TRGV3P03979 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms