Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
KRT6AP02538 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
KRT6AP02538 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
KRT6AP02538 RN7SL692P-201ENST00000464677 288 ntBASIC14.1□□□□□ -0.15
KRT6AP02538 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.1□□□□□ -0.15
KRT6AP02538 COX5BP1-201ENST00000507622 393 ntBASIC14.1□□□□□ -0.15
KRT6AP02538 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.1□□□□□ -0.15
KRT6AP02538 AP003171.2-201ENST00000528208 925 ntBASIC14.1□□□□□ -0.15
KRT6AP02538 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
KRT6AP02538 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
KRT6AP02538 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.1□□□□□ -0.15
KRT6AP02538 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.1□□□□□ -0.15
KRT6AP02538 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.1□□□□□ -0.15
KRT6AP02538 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
KRT6AP02538 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
KRT6AP02538 BTNL10-201ENST00000595971 695 ntBASIC14.1□□□□□ -0.15
KRT6AP02538 AC008735.3-201ENST00000596646 500 ntBASIC14.1□□□□□ -0.15
KRT6AP02538 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KRT6AP02538 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.1□□□□□ -0.15
KRT6AP02538 AC027601.3-201ENST00000622907 509 ntBASIC14.1□□□□□ -0.15
KRT6AP02538 AC138951.2-201ENST00000623455 1161 ntBASIC14.1□□□□□ -0.15
KRT6AP02538 AL358472.5-202ENST00000641448 1267 ntBASIC14.1□□□□□ -0.15
KRT6AP02538 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
KRT6AP02538 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
KRT6AP02538 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
KRT6AP02538 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.1□□□□□ -0.15
KRT6AP02538 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KRT6AP02538 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
KRT6AP02538 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.1□□□□□ -0.15
KRT6AP02538 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.1□□□□□ -0.15
KRT6AP02538 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.1□□□□□ -0.15
KRT6AP02538 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.1□□□□□ -0.15
KRT6AP02538 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.1□□□□□ -0.15
KRT6AP02538 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KRT6AP02538 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
KRT6AP02538 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
KRT6AP02538 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
KRT6AP02538 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KRT6AP02538 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
KRT6AP02538 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
KRT6AP02538 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.1□□□□□ -0.15
KRT6AP02538 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KRT6AP02538 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
KRT6AP02538 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KRT6AP02538 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
KRT6AP02538 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KRT6AP02538 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
KRT6AP02538 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
KRT6AP02538 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
KRT6AP02538 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.09□□□□□ -0.15
KRT6AP02538 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC14.09□□□□□ -0.15
KRT6AP02538 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
KRT6AP02538 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
KRT6AP02538 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
KRT6AP02538 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
KRT6AP02538 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
KRT6AP02538 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KRT6AP02538 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KRT6AP02538 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KRT6AP02538 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.09□□□□□ -0.15
KRT6AP02538 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
KRT6AP02538 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
KRT6AP02538 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
KRT6AP02538 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
KRT6AP02538 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.09□□□□□ -0.15
KRT6AP02538 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KRT6AP02538 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
KRT6AP02538 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KRT6AP02538 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.09□□□□□ -0.15
KRT6AP02538 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.09□□□□□ -0.15
KRT6AP02538 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KRT6AP02538 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
KRT6AP02538 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.09□□□□□ -0.15
KRT6AP02538 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.09□□□□□ -0.15
KRT6AP02538 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
KRT6AP02538 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.09□□□□□ -0.15
KRT6AP02538 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.09□□□□□ -0.15
KRT6AP02538 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.09□□□□□ -0.15
KRT6AP02538 AL161932.2-201ENST00000435436 679 ntBASIC14.09□□□□□ -0.15
KRT6AP02538 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.09□□□□□ -0.15
KRT6AP02538 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.09□□□□□ -0.15
KRT6AP02538 INE1-201ENST00000456273 945 ntBASIC14.09□□□□□ -0.15
KRT6AP02538 FTH1P14-201ENST00000482930 551 ntBASIC14.09□□□□□ -0.15
KRT6AP02538 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KRT6AP02538 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.09□□□□□ -0.15
KRT6AP02538 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.09□□□□□ -0.15
KRT6AP02538 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.09□□□□□ -0.15
KRT6AP02538 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.09□□□□□ -0.15
KRT6AP02538 MIR4683-201ENST00000579659 81 ntBASIC14.09□□□□□ -0.15
KRT6AP02538 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.09□□□□□ -0.15
KRT6AP02538 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.09□□□□□ -0.15
KRT6AP02538 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.09□□□□□ -0.15
KRT6AP02538 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.09□□□□□ -0.15
KRT6AP02538 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.09□□□□□ -0.15
KRT6AP02538 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
KRT6AP02538 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
KRT6AP02538 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
KRT6AP02538 AL139385.1-201ENST00000611744 3272 ntBASIC14.09□□□□□ -0.15
KRT6AP02538 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
KRT6AP02538 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms