Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
HLA-DRAP01903 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DRAP01903 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DRAP01903 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC15.53■□□□□ 0.08
HLA-DRAP01903 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DRAP01903 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DRAP01903 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC15.53■□□□□ 0.08
HLA-DRAP01903 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
HLA-DRAP01903 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.53■□□□□ 0.08
HLA-DRAP01903 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
HLA-DRAP01903 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DRAP01903 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.53■□□□□ 0.08
HLA-DRAP01903 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.53■□□□□ 0.08
HLA-DRAP01903 DDC-213ENST00000617822 1809 ntTSL 3 BASIC15.53■□□□□ 0.08
HLA-DRAP01903 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DRAP01903 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.53■□□□□ 0.08
HLA-DRAP01903 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DRAP01903 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DRAP01903 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DRAP01903 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.53■□□□□ 0.08
HLA-DRAP01903 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
HLA-DRAP01903 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC15.53■□□□□ 0.08
HLA-DRAP01903 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.53■□□□□ 0.08
HLA-DRAP01903 MARK2P5-201ENST00000507649 634 ntBASIC15.53■□□□□ 0.08
HLA-DRAP01903 ZNF767P-206ENST00000513792 565 ntBASIC15.53■□□□□ 0.08
HLA-DRAP01903 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC15.53■□□□□ 0.08
HLA-DRAP01903 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.53■□□□□ 0.08
HLA-DRAP01903 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.53■□□□□ 0.08
HLA-DRAP01903 AC243960.2-201ENST00000600996 747 ntBASIC15.53■□□□□ 0.08
HLA-DRAP01903 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC15.53■□□□□ 0.08
HLA-DRAP01903 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DRAP01903 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DRAP01903 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DRAP01903 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DRAP01903 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DRAP01903 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DRAP01903 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.53■□□□□ 0.08
HLA-DRAP01903 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DRAP01903 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DRAP01903 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
HLA-DRAP01903 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DRAP01903 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DRAP01903 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC15.53■□□□□ 0.08
HLA-DRAP01903 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DRAP01903 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DRAP01903 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.53■□□□□ 0.08
HLA-DRAP01903 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.53■□□□□ 0.08
HLA-DRAP01903 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DRAP01903 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.53■□□□□ 0.08
HLA-DRAP01903 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DRAP01903 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.52■□□□□ 0.08
HLA-DRAP01903 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DRAP01903 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.52■□□□□ 0.08
HLA-DRAP01903 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
HLA-DRAP01903 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.52■□□□□ 0.08
HLA-DRAP01903 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
HLA-DRAP01903 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.52■□□□□ 0.08
HLA-DRAP01903 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
HLA-DRAP01903 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
HLA-DRAP01903 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DRAP01903 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DRAP01903 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DRAP01903 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DRAP01903 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DRAP01903 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.08
HLA-DRAP01903 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
HLA-DRAP01903 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
HLA-DRAP01903 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DRAP01903 CCT8L1P-201ENST00000465400 1674 ntBASIC15.52■□□□□ 0.08
HLA-DRAP01903 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DRAP01903 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DRAP01903 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DRAP01903 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DRAP01903 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
HLA-DRAP01903 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.52■□□□□ 0.08
HLA-DRAP01903 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
HLA-DRAP01903 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DRAP01903 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
HLA-DRAP01903 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.52■□□□□ 0.08
HLA-DRAP01903 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.52■□□□□ 0.08
HLA-DRAP01903 AC092580.1-201ENST00000433998 658 ntBASIC15.52■□□□□ 0.08
HLA-DRAP01903 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.52■□□□□ 0.08
HLA-DRAP01903 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.52■□□□□ 0.08
HLA-DRAP01903 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DRAP01903 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.52■□□□□ 0.08
HLA-DRAP01903 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
HLA-DRAP01903 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DRAP01903 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC15.52■□□□□ 0.08
HLA-DRAP01903 AL157813.1-201ENST00000612996 587 ntBASIC15.52■□□□□ 0.08
HLA-DRAP01903 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DRAP01903 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
HLA-DRAP01903 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HLA-DRAP01903 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HLA-DRAP01903 AP002353.1-201ENST00000528257 1599 ntBASIC15.52■□□□□ 0.07
HLA-DRAP01903 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HLA-DRAP01903 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.52■□□□□ 0.07
HLA-DRAP01903 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HLA-DRAP01903 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HLA-DRAP01903 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HLA-DRAP01903 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms