Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
POLR1AO95602 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC20.41■□□□□ 0.86
POLR1AO95602 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
POLR1AO95602 ASS1P2-201ENST00000439895 1223 ntBASIC20.41■□□□□ 0.86
POLR1AO95602 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC20.41■□□□□ 0.86
POLR1AO95602 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC20.41■□□□□ 0.86
POLR1AO95602 MIR6893-201ENST00000613458 69 ntBASIC20.41■□□□□ 0.86
POLR1AO95602 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC20.41■□□□□ 0.86
POLR1AO95602 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
POLR1AO95602 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
POLR1AO95602 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
POLR1AO95602 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
POLR1AO95602 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
POLR1AO95602 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
POLR1AO95602 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC20.4■□□□□ 0.86
POLR1AO95602 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
POLR1AO95602 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
POLR1AO95602 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC20.4■□□□□ 0.86
POLR1AO95602 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
POLR1AO95602 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
POLR1AO95602 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC20.4■□□□□ 0.86
POLR1AO95602 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
POLR1AO95602 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC20.4■□□□□ 0.86
POLR1AO95602 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
POLR1AO95602 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
POLR1AO95602 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
POLR1AO95602 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
POLR1AO95602 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC20.4■□□□□ 0.86
POLR1AO95602 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
POLR1AO95602 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC20.4■□□□□ 0.86
POLR1AO95602 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC20.4■□□□□ 0.86
POLR1AO95602 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC20.4■□□□□ 0.86
POLR1AO95602 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
POLR1AO95602 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC20.4■□□□□ 0.86
POLR1AO95602 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC20.4■□□□□ 0.86
POLR1AO95602 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
POLR1AO95602 NEK4P3-201ENST00000604859 544 ntBASIC20.4■□□□□ 0.86
POLR1AO95602 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC20.4■□□□□ 0.86
POLR1AO95602 CICP16-201ENST00000502609 2813 ntBASIC20.4■□□□□ 0.86
POLR1AO95602 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
POLR1AO95602 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
POLR1AO95602 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC20.4■□□□□ 0.86
POLR1AO95602 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
POLR1AO95602 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC20.4■□□□□ 0.86
POLR1AO95602 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
POLR1AO95602 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
POLR1AO95602 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
POLR1AO95602 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
POLR1AO95602 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC20.39■□□□□ 0.86
POLR1AO95602 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
POLR1AO95602 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
POLR1AO95602 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
POLR1AO95602 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
POLR1AO95602 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
POLR1AO95602 AC073210.1-201ENST00000414799 232 ntBASIC20.39■□□□□ 0.86
POLR1AO95602 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC20.39■□□□□ 0.86
POLR1AO95602 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
POLR1AO95602 URB1-AS1-201ENST00000534991 831 ntBASIC20.39■□□□□ 0.86
POLR1AO95602 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC20.39■□□□□ 0.86
POLR1AO95602 AC140658.4-201ENST00000561990 352 ntBASIC20.39■□□□□ 0.86
POLR1AO95602 AC145285.5-201ENST00000562217 361 ntBASIC20.39■□□□□ 0.86
POLR1AO95602 AC079414.2-201ENST00000567157 1104 ntBASIC20.39■□□□□ 0.86
POLR1AO95602 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC20.39■□□□□ 0.86
POLR1AO95602 MIR4254-201ENST00000581063 76 ntBASIC20.39■□□□□ 0.86
POLR1AO95602 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
POLR1AO95602 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
POLR1AO95602 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC20.39■□□□□ 0.85
POLR1AO95602 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
POLR1AO95602 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
POLR1AO95602 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
POLR1AO95602 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
POLR1AO95602 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
POLR1AO95602 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
POLR1AO95602 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC20.39■□□□□ 0.85
POLR1AO95602 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
POLR1AO95602 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
POLR1AO95602 AIRN-201ENST00000601203 4374 ntBASIC20.39■□□□□ 0.85
POLR1AO95602 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
POLR1AO95602 AC007952.5-201ENST00000572818 1486 ntBASIC20.39■□□□□ 0.85
POLR1AO95602 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC20.39■□□□□ 0.85
POLR1AO95602 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC20.39■□□□□ 0.85
POLR1AO95602 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
POLR1AO95602 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
POLR1AO95602 AP000244.1-201ENST00000424582 201 ntBASIC20.39■□□□□ 0.85
POLR1AO95602 FDPSP7-201ENST00000429043 1054 ntBASIC20.39■□□□□ 0.85
POLR1AO95602 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC20.39■□□□□ 0.85
POLR1AO95602 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC20.39■□□□□ 0.85
POLR1AO95602 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC20.39■□□□□ 0.85
POLR1AO95602 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC20.39■□□□□ 0.85
POLR1AO95602 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC20.39■□□□□ 0.85
POLR1AO95602 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC20.39■□□□□ 0.85
POLR1AO95602 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
POLR1AO95602 AL021707.6-201ENST00000609212 491 ntBASIC20.39■□□□□ 0.85
POLR1AO95602 HPX-213ENST00000615166 826 ntTSL 5 BASIC20.39■□□□□ 0.85
POLR1AO95602 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
POLR1AO95602 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
POLR1AO95602 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC20.38■□□□□ 0.85
POLR1AO95602 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
POLR1AO95602 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
POLR1AO95602 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms