Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAPGEF3O95398 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC21.04■□□□□ 0.96
RAPGEF3O95398 AC018442.1-201ENST00000421439 2061 ntBASIC21.04■□□□□ 0.96
RAPGEF3O95398 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
RAPGEF3O95398 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAPGEF3O95398 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
RAPGEF3O95398 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAPGEF3O95398 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAPGEF3O95398 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC21.04■□□□□ 0.96
RAPGEF3O95398 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC21.04■□□□□ 0.96
RAPGEF3O95398 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RAPGEF3O95398 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAPGEF3O95398 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAPGEF3O95398 KRT8P38-201ENST00000441370 1430 ntBASIC21.04■□□□□ 0.96
RAPGEF3O95398 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAPGEF3O95398 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAPGEF3O95398 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAPGEF3O95398 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
RAPGEF3O95398 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RAPGEF3O95398 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAPGEF3O95398 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAPGEF3O95398 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAPGEF3O95398 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC21.03■□□□□ 0.96
RAPGEF3O95398 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RAPGEF3O95398 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RAPGEF3O95398 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAPGEF3O95398 AC064850.1-201ENST00000413279 1398 ntBASIC21.03■□□□□ 0.96
RAPGEF3O95398 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAPGEF3O95398 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RAPGEF3O95398 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RAPGEF3O95398 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAPGEF3O95398 MPV17-209ENST00000405983 859 ntTSL 5 BASIC21.03■□□□□ 0.96
RAPGEF3O95398 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RAPGEF3O95398 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC21.03■□□□□ 0.96
RAPGEF3O95398 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RAPGEF3O95398 EMP3-204ENST00000596315 761 ntTSL 2 BASIC21.03■□□□□ 0.96
RAPGEF3O95398 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC21.03■□□□□ 0.96
RAPGEF3O95398 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
RAPGEF3O95398 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC21.03■□□□□ 0.96
RAPGEF3O95398 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC21.03■□□□□ 0.96
RAPGEF3O95398 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAPGEF3O95398 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC21.03■□□□□ 0.96
RAPGEF3O95398 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RAPGEF3O95398 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RAPGEF3O95398 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
RAPGEF3O95398 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAPGEF3O95398 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAPGEF3O95398 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC21.03■□□□□ 0.96
RAPGEF3O95398 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC21.03■□□□□ 0.96
RAPGEF3O95398 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAPGEF3O95398 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAPGEF3O95398 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC21.03■□□□□ 0.96
RAPGEF3O95398 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC21.03■□□□□ 0.96
RAPGEF3O95398 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAPGEF3O95398 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
RAPGEF3O95398 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAPGEF3O95398 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
RAPGEF3O95398 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
RAPGEF3O95398 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
RAPGEF3O95398 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAPGEF3O95398 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAPGEF3O95398 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAPGEF3O95398 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAPGEF3O95398 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAPGEF3O95398 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC21.02■□□□□ 0.96
RAPGEF3O95398 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC21.02■□□□□ 0.96
RAPGEF3O95398 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
RAPGEF3O95398 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RAPGEF3O95398 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RAPGEF3O95398 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RAPGEF3O95398 DNM1P46-202ENST00000415963 882 ntBASIC21.02■□□□□ 0.96
RAPGEF3O95398 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC21.02■□□□□ 0.96
RAPGEF3O95398 UGT1A12P-201ENST00000447084 853 ntBASIC21.02■□□□□ 0.96
RAPGEF3O95398 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC21.02■□□□□ 0.96
RAPGEF3O95398 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC21.02■□□□□ 0.96
RAPGEF3O95398 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC21.02■□□□□ 0.96
RAPGEF3O95398 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC21.02■□□□□ 0.96
RAPGEF3O95398 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC21.02■□□□□ 0.96
RAPGEF3O95398 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAPGEF3O95398 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAPGEF3O95398 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
RAPGEF3O95398 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
RAPGEF3O95398 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
RAPGEF3O95398 OR6D1P-203ENST00000641209 4860 ntBASIC21.01■□□□□ 0.95
RAPGEF3O95398 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC21.01■□□□□ 0.95
RAPGEF3O95398 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RAPGEF3O95398 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RAPGEF3O95398 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAPGEF3O95398 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RAPGEF3O95398 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RAPGEF3O95398 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAPGEF3O95398 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAPGEF3O95398 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC21.01■□□□□ 0.95
RAPGEF3O95398 AC000077.1-201ENST00000420012 953 ntBASIC21.01■□□□□ 0.95
RAPGEF3O95398 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC21.01■□□□□ 0.95
RAPGEF3O95398 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
RAPGEF3O95398 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC21.01■□□□□ 0.95
RAPGEF3O95398 AC093700.1-201ENST00000503348 717 ntBASIC21.01■□□□□ 0.95
RAPGEF3O95398 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RAPGEF3O95398 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms