Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
NPIPB4C9JG80 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.76□□□□□ -0.37
NPIPB4C9JG80 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 AC111170.3-201ENST00000624282 2464 ntBASIC12.76□□□□□ -0.37
NPIPB4C9JG80 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 SMS-201ENST00000379404 1174 ntTSL 3 BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 MFF-223ENST00000524634 647 ntTSL 2 BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 AC005730.2-201ENST00000564549 1184 ntBASIC12.76□□□□□ -0.37
NPIPB4C9JG80 RN7SL560P-201ENST00000577943 264 ntBASIC12.76□□□□□ -0.37
NPIPB4C9JG80 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 AC008805.1-201ENST00000590892 364 ntBASIC12.76□□□□□ -0.37
NPIPB4C9JG80 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 AL096828.3-201ENST00000615354 462 ntBASIC12.76□□□□□ -0.37
NPIPB4C9JG80 AL136295.7-201ENST00000619226 1200 ntBASIC12.76□□□□□ -0.37
NPIPB4C9JG80 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 RCC2P1-201ENST00000452257 1476 ntBASIC12.76□□□□□ -0.37
NPIPB4C9JG80 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 MARK2P9-201ENST00000430958 1727 ntBASIC12.76□□□□□ -0.37
NPIPB4C9JG80 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 AC073548.1-201ENST00000624088 1882 ntBASIC12.76□□□□□ -0.37
NPIPB4C9JG80 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 AC015909.5-201ENST00000624336 2266 ntBASIC12.76□□□□□ -0.37
NPIPB4C9JG80 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 AC130686.1-201ENST00000622936 2466 ntBASIC12.76□□□□□ -0.37
NPIPB4C9JG80 TK2-221ENST00000620035 5060 ntTSL 2 BASIC12.76□□□□□ -0.37
NPIPB4C9JG80 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 TUBB1P2-201ENST00000422712 1306 ntBASIC12.75□□□□□ -0.37
NPIPB4C9JG80 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
NPIPB4C9JG80 GOLGA2P4-201ENST00000441462 777 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms