Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.48■□□□□ 0.39
RGPD3A6NKT7 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RGPD3A6NKT7 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
RGPD3A6NKT7 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RGPD3A6NKT7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.48■□□□□ 0.39
RGPD3A6NKT7 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC17.48■□□□□ 0.39
RGPD3A6NKT7 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RGPD3A6NKT7 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RGPD3A6NKT7 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
RGPD3A6NKT7 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RGPD3A6NKT7 LYG2-201ENST00000333017 862 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RGPD3A6NKT7 TPM3P7-201ENST00000338274 732 ntBASIC17.48■□□□□ 0.39
RGPD3A6NKT7 PTPA-219ENST00000435305 530 ntTSL 2 BASIC17.48■□□□□ 0.39
RGPD3A6NKT7 DDX11L8-201ENST00000535849 366 ntBASIC17.48■□□□□ 0.39
RGPD3A6NKT7 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RGPD3A6NKT7 AC099552.4-201ENST00000624248 949 ntBASIC17.48■□□□□ 0.39
RGPD3A6NKT7 AC005906.2-208ENST00000638655 1286 ntTSL 5 BASIC17.48■□□□□ 0.39
RGPD3A6NKT7 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC17.48■□□□□ 0.39
RGPD3A6NKT7 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC17.48■□□□□ 0.39
RGPD3A6NKT7 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC17.47■□□□□ 0.39
RGPD3A6NKT7 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RGPD3A6NKT7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RGPD3A6NKT7 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RGPD3A6NKT7 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.47■□□□□ 0.39
RGPD3A6NKT7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RGPD3A6NKT7 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RGPD3A6NKT7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RGPD3A6NKT7 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.47■□□□□ 0.39
RGPD3A6NKT7 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RGPD3A6NKT7 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RGPD3A6NKT7 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RGPD3A6NKT7 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC17.47■□□□□ 0.39
RGPD3A6NKT7 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC17.47■□□□□ 0.39
RGPD3A6NKT7 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RGPD3A6NKT7 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RGPD3A6NKT7 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RGPD3A6NKT7 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.47■□□□□ 0.39
RGPD3A6NKT7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RGPD3A6NKT7 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RGPD3A6NKT7 AC007279.1-201ENST00000448547 837 ntBASIC17.47■□□□□ 0.39
RGPD3A6NKT7 SMIM14-205ENST00000511809 830 ntTSL 2 BASIC17.47■□□□□ 0.39
RGPD3A6NKT7 NEMF-210ENST00000556672 590 ntTSL 2 BASIC17.47■□□□□ 0.39
RGPD3A6NKT7 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC17.47■□□□□ 0.39
RGPD3A6NKT7 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RGPD3A6NKT7 NRADDP-202ENST00000641269 1585 ntBASIC17.47■□□□□ 0.39
RGPD3A6NKT7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.47■□□□□ 0.39
RGPD3A6NKT7 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RGPD3A6NKT7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RGPD3A6NKT7 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
RGPD3A6NKT7 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RGPD3A6NKT7 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.47■□□□□ 0.39
RGPD3A6NKT7 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RGPD3A6NKT7 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RGPD3A6NKT7 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.47■□□□□ 0.39
RGPD3A6NKT7 AC089987.1-201ENST00000551654 2209 ntBASIC17.46■□□□□ 0.39
RGPD3A6NKT7 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
RGPD3A6NKT7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.46■□□□□ 0.39
RGPD3A6NKT7 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC17.46■□□□□ 0.39
RGPD3A6NKT7 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RGPD3A6NKT7 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RGPD3A6NKT7 RPS6-201ENST00000315377 863 ntTSL 3 BASIC17.46■□□□□ 0.39
RGPD3A6NKT7 RNA5SP84-201ENST00000364740 107 ntBASIC17.46■□□□□ 0.39
RGPD3A6NKT7 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
RGPD3A6NKT7 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RGPD3A6NKT7 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RGPD3A6NKT7 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RGPD3A6NKT7 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RGPD3A6NKT7 AC138392.1-201ENST00000427577 921 ntBASIC17.46■□□□□ 0.39
RGPD3A6NKT7 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.46■□□□□ 0.39
RGPD3A6NKT7 RPL35P1-201ENST00000450819 370 ntBASIC17.46■□□□□ 0.39
RGPD3A6NKT7 POLR2J2-203ENST00000476151 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RGPD3A6NKT7 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC17.46■□□□□ 0.39
RGPD3A6NKT7 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC17.46■□□□□ 0.39
RGPD3A6NKT7 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.46■□□□□ 0.39
RGPD3A6NKT7 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC17.46■□□□□ 0.39
RGPD3A6NKT7 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC17.46■□□□□ 0.39
RGPD3A6NKT7 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC17.46■□□□□ 0.39
RGPD3A6NKT7 AC011270.2-201ENST00000624293 2550 ntBASIC17.46■□□□□ 0.39
RGPD3A6NKT7 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.46■□□□□ 0.39
RGPD3A6NKT7 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RGPD3A6NKT7 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RGPD3A6NKT7 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC17.46■□□□□ 0.39
RGPD3A6NKT7 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
RGPD3A6NKT7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
RGPD3A6NKT7 TPT1-201ENST00000309246 1008 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RGPD3A6NKT7 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RGPD3A6NKT7 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RGPD3A6NKT7 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC17.45■□□□□ 0.38
RGPD3A6NKT7 TMEM256P1-201ENST00000430550 340 ntBASIC17.45■□□□□ 0.38
RGPD3A6NKT7 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RGPD3A6NKT7 PRDX3P2-201ENST00000447051 611 ntBASIC17.45■□□□□ 0.38
RGPD3A6NKT7 AL583804.1-201ENST00000448643 810 ntTSL 3 BASIC17.45■□□□□ 0.38
RGPD3A6NKT7 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC17.45■□□□□ 0.38
RGPD3A6NKT7 GABARAPL2-203ENST00000565057 571 ntTSL 2 BASIC17.45■□□□□ 0.38
RGPD3A6NKT7 KRT18P8-201ENST00000581937 1246 ntBASIC17.45■□□□□ 0.38
RGPD3A6NKT7 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC17.45■□□□□ 0.38
RGPD3A6NKT7 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC17.45■□□□□ 0.38
RGPD3A6NKT7 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC17.45■□□□□ 0.38
RGPD3A6NKT7 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC17.45■□□□□ 0.38
RGPD3A6NKT7 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms