Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 AC138466.3-201ENST00000619983 221 ntBASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 HARS-202ENST00000415192 1401 ntTSL 2 BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 POM121L10P-201ENST00000436994 1285 ntBASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 AC004898.1-201ENST00000451057 766 ntBASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 AC026434.2-201ENST00000506094 1078 ntBASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 NCK2-206ENST00000522586 490 ntTSL 5 BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 DUX4L47-201ENST00000566374 394 ntBASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 AC020914.3-201ENST00000594712 304 ntBASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 AC073413.1-201ENST00000603927 732 ntBASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC11.71□□□□□ -0.53
TCRBV4S1A1TA0A5B7 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TCRBV4S1A1TA0A5B7 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TCRBV4S1A1TA0A5B7 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
TCRBV4S1A1TA0A5B7 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC11.71□□□□□ -0.54
TCRBV4S1A1TA0A5B7 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TCRBV4S1A1TA0A5B7 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
TCRBV4S1A1TA0A5B7 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TCRBV4S1A1TA0A5B7 AL031595.1-201ENST00000623969 4709 ntBASIC11.71□□□□□ -0.54
TCRBV4S1A1TA0A5B7 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC11.71□□□□□ -0.54
TCRBV4S1A1TA0A5B7 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
TCRBV4S1A1TA0A5B7 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
TCRBV4S1A1TA0A5B7 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TCRBV4S1A1TA0A5B7 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TCRBV4S1A1TA0A5B7 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TCRBV4S1A1TA0A5B7 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TCRBV4S1A1TA0A5B7 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
TCRBV4S1A1TA0A5B7 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
TCRBV4S1A1TA0A5B7 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC11.71□□□□□ -0.54
TCRBV4S1A1TA0A5B7 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TCRBV4S1A1TA0A5B7 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TCRBV4S1A1TA0A5B7 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TCRBV4S1A1TA0A5B7 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TCRBV4S1A1TA0A5B7 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC11.7□□□□□ -0.54
TCRBV4S1A1TA0A5B7 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TCRBV4S1A1TA0A5B7 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC11.7□□□□□ -0.54
TCRBV4S1A1TA0A5B7 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TCRBV4S1A1TA0A5B7 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC11.7□□□□□ -0.54
TCRBV4S1A1TA0A5B7 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
TCRBV4S1A1TA0A5B7 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TCRBV4S1A1TA0A5B7 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC11.7□□□□□ -0.54
TCRBV4S1A1TA0A5B7 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms