Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 AL512384.1-201ENST00000406683 331 ntBASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 AL391280.1-201ENST00000506969 1062 ntBASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 SLC25A47P1-201ENST00000531577 414 ntBASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 AC025279.2-201ENST00000569730 653 ntBASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 AC233724.13-201ENST00000598383 410 ntBASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 AC138951.2-201ENST00000623455 1161 ntBASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
POLR1DQ9Y2S0 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
POLR1DQ9Y2S0 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
POLR1DQ9Y2S0 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
POLR1DQ9Y2S0 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.02□□□□□ -0.32
POLR1DQ9Y2S0 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
POLR1DQ9Y2S0 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
POLR1DQ9Y2S0 AC012617.1-204ENST00000586340 2305 ntBASIC13.02□□□□□ -0.32
POLR1DQ9Y2S0 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
POLR1DQ9Y2S0 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
POLR1DQ9Y2S0 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
POLR1DQ9Y2S0 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.02□□□□□ -0.32
POLR1DQ9Y2S0 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
POLR1DQ9Y2S0 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.02□□□□□ -0.32
POLR1DQ9Y2S0 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
POLR1DQ9Y2S0 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.02□□□□□ -0.32
POLR1DQ9Y2S0 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
POLR1DQ9Y2S0 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
POLR1DQ9Y2S0 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
POLR1DQ9Y2S0 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.02□□□□□ -0.32
POLR1DQ9Y2S0 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
POLR1DQ9Y2S0 INE2-201ENST00000630399 1874 ntBASIC13.02□□□□□ -0.32
POLR1DQ9Y2S0 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
POLR1DQ9Y2S0 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC13.02□□□□□ -0.32
POLR1DQ9Y2S0 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
POLR1DQ9Y2S0 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
POLR1DQ9Y2S0 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC13.02□□□□□ -0.33
POLR1DQ9Y2S0 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
POLR1DQ9Y2S0 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
POLR1DQ9Y2S0 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
POLR1DQ9Y2S0 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
POLR1DQ9Y2S0 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
POLR1DQ9Y2S0 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.02□□□□□ -0.33
POLR1DQ9Y2S0 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.33
POLR1DQ9Y2S0 KRT43P-201ENST00000434019 910 ntBASIC13.02□□□□□ -0.33
POLR1DQ9Y2S0 FAM8A4P-201ENST00000435433 1213 ntBASIC13.02□□□□□ -0.33
POLR1DQ9Y2S0 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
POLR1DQ9Y2S0 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.02□□□□□ -0.33
POLR1DQ9Y2S0 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.02□□□□□ -0.33
POLR1DQ9Y2S0 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.02□□□□□ -0.33
POLR1DQ9Y2S0 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.02□□□□□ -0.33
POLR1DQ9Y2S0 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
POLR1DQ9Y2S0 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
POLR1DQ9Y2S0 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
POLR1DQ9Y2S0 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
POLR1DQ9Y2S0 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.02□□□□□ -0.33
POLR1DQ9Y2S0 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.02□□□□□ -0.33
POLR1DQ9Y2S0 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.02□□□□□ -0.33
POLR1DQ9Y2S0 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.02□□□□□ -0.33
POLR1DQ9Y2S0 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.02□□□□□ -0.33
POLR1DQ9Y2S0 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
POLR1DQ9Y2S0 RPSAP52-203ENST00000622976 1023 ntBASIC13.02□□□□□ -0.33
POLR1DQ9Y2S0 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
POLR1DQ9Y2S0 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
POLR1DQ9Y2S0 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.02□□□□□ -0.33
POLR1DQ9Y2S0 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
POLR1DQ9Y2S0 AL928921.2-201ENST00000641325 2442 ntBASIC13.02□□□□□ -0.33
POLR1DQ9Y2S0 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
POLR1DQ9Y2S0 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms