Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DKK4Q9UBT3 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
DKK4Q9UBT3 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.21□□□□□ -0.29
DKK4Q9UBT3 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DKK4Q9UBT3 HLA-DMA-202ENST00000395303 1007 ntBASIC13.21□□□□□ -0.29
DKK4Q9UBT3 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC13.21□□□□□ -0.29
DKK4Q9UBT3 KRT19P4-201ENST00000443208 943 ntBASIC13.21□□□□□ -0.29
DKK4Q9UBT3 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
DKK4Q9UBT3 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC13.21□□□□□ -0.29
DKK4Q9UBT3 ISL1-203ENST00000511384 981 ntTSL 5 BASIC13.21□□□□□ -0.29
DKK4Q9UBT3 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC13.21□□□□□ -0.29
DKK4Q9UBT3 MT3-202ENST00000561640 514 ntTSL 3 BASIC13.21□□□□□ -0.29
DKK4Q9UBT3 AC132825.4-202ENST00000578792 434 ntBASIC13.21□□□□□ -0.29
DKK4Q9UBT3 AL450487.2-201ENST00000615934 407 ntBASIC13.21□□□□□ -0.29
DKK4Q9UBT3 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
DKK4Q9UBT3 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.21□□□□□ -0.3
DKK4Q9UBT3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
DKK4Q9UBT3 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
DKK4Q9UBT3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.21□□□□□ -0.3
DKK4Q9UBT3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.21□□□□□ -0.3
DKK4Q9UBT3 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
DKK4Q9UBT3 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.21□□□□□ -0.3
DKK4Q9UBT3 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
DKK4Q9UBT3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
DKK4Q9UBT3 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
DKK4Q9UBT3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
DKK4Q9UBT3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
DKK4Q9UBT3 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
DKK4Q9UBT3 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 JPT2-203ENST00000382711 894 ntTSL 4 BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 TPT1P6-201ENST00000458298 514 ntBASIC13.2□□□□□ -0.3
DKK4Q9UBT3 RN7SL672P-201ENST00000474091 317 ntBASIC13.2□□□□□ -0.3
DKK4Q9UBT3 RPSAP70-201ENST00000504462 864 ntBASIC13.2□□□□□ -0.3
DKK4Q9UBT3 GOLGA2P8-201ENST00000505201 779 ntBASIC13.2□□□□□ -0.3
DKK4Q9UBT3 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 ACY3-202ENST00000529256 933 ntTSL 3 BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 CMC2-204ENST00000562713 573 ntTSL 3 BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 CMC2-209ENST00000565108 399 ntTSL 2 BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 KRT8P34-201ENST00000577607 1044 ntBASIC13.2□□□□□ -0.3
DKK4Q9UBT3 RN7SL440P-201ENST00000577855 343 ntBASIC13.2□□□□□ -0.3
DKK4Q9UBT3 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 AC126755.5-201ENST00000622756 267 ntBASIC13.2□□□□□ -0.3
DKK4Q9UBT3 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 RPL13AP3-202ENST00000494676 1473 ntBASIC13.2□□□□□ -0.3
DKK4Q9UBT3 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 PPT1-215ENST00000641471 2368 ntBASIC13.2□□□□□ -0.3
DKK4Q9UBT3 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
DKK4Q9UBT3 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.19□□□□□ -0.3
DKK4Q9UBT3 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DKK4Q9UBT3 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
DKK4Q9UBT3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DKK4Q9UBT3 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.19□□□□□ -0.3
DKK4Q9UBT3 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.19□□□□□ -0.3
DKK4Q9UBT3 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
DKK4Q9UBT3 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms