Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCL13Q99616 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
CCL13Q99616 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL13Q99616 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.16□□□□□ -0.46
CCL13Q99616 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
CCL13Q99616 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL13Q99616 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.16□□□□□ -0.46
CCL13Q99616 AC144522.1-201ENST00000625111 1658 ntBASIC12.16□□□□□ -0.46
CCL13Q99616 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CCL13Q99616 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL13Q99616 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.16□□□□□ -0.46
CCL13Q99616 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL13Q99616 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CCL13Q99616 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL13Q99616 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
CCL13Q99616 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL13Q99616 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CCL13Q99616 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL13Q99616 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL13Q99616 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL13Q99616 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL13Q99616 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.16□□□□□ -0.46
CCL13Q99616 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.16□□□□□ -0.46
CCL13Q99616 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CCL13Q99616 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.16□□□□□ -0.46
CCL13Q99616 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL13Q99616 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
CCL13Q99616 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CCL13Q99616 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL13Q99616 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL13Q99616 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.16□□□□□ -0.46
CCL13Q99616 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC12.16□□□□□ -0.46
CCL13Q99616 AC104073.2-201ENST00000453737 312 ntBASIC12.16□□□□□ -0.46
CCL13Q99616 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.16□□□□□ -0.46
CCL13Q99616 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CCL13Q99616 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC12.16□□□□□ -0.46
CCL13Q99616 SCARNA21-201ENST00000517026 139 ntBASIC12.16□□□□□ -0.46
CCL13Q99616 AC126915.1-201ENST00000522847 1038 ntBASIC12.16□□□□□ -0.46
CCL13Q99616 RN7SL163P-201ENST00000583100 276 ntBASIC12.16□□□□□ -0.46
CCL13Q99616 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
CCL13Q99616 BNIP3P13-201ENST00000599968 566 ntBASIC12.16□□□□□ -0.46
CCL13Q99616 AC022748.3-201ENST00000621828 275 ntBASIC12.16□□□□□ -0.46
CCL13Q99616 AC004923.1-202ENST00000642106 209 ntBASIC12.16□□□□□ -0.46
CCL13Q99616 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.16□□□□□ -0.46
CCL13Q99616 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL13Q99616 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL13Q99616 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL13Q99616 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL13Q99616 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.16□□□□□ -0.46
CCL13Q99616 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL13Q99616 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CCL13Q99616 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
CCL13Q99616 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CCL13Q99616 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL13Q99616 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL13Q99616 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CCL13Q99616 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL13Q99616 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL13Q99616 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL13Q99616 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CCL13Q99616 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL13Q99616 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL13Q99616 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
CCL13Q99616 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCL13Q99616 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCL13Q99616 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CCL13Q99616 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCL13Q99616 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
CCL13Q99616 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCL13Q99616 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCL13Q99616 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCL13Q99616 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.15□□□□□ -0.46
CCL13Q99616 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CCL13Q99616 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
CCL13Q99616 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CCL13Q99616 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CCL13Q99616 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCL13Q99616 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCL13Q99616 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC12.15□□□□□ -0.46
CCL13Q99616 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCL13Q99616 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCL13Q99616 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCL13Q99616 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC12.15□□□□□ -0.46
CCL13Q99616 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCL13Q99616 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCL13Q99616 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCL13Q99616 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC12.15□□□□□ -0.46
CCL13Q99616 HNRNPA1P32-201ENST00000396326 963 ntBASIC12.15□□□□□ -0.46
CCL13Q99616 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCL13Q99616 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC12.15□□□□□ -0.46
CCL13Q99616 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC12.15□□□□□ -0.46
CCL13Q99616 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC12.15□□□□□ -0.46
CCL13Q99616 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CCL13Q99616 SERPINA13P-202ENST00000478994 924 ntBASIC12.15□□□□□ -0.46
CCL13Q99616 AC006122.1-201ENST00000493323 440 ntBASIC12.15□□□□□ -0.46
CCL13Q99616 AC005740.2-201ENST00000511085 419 ntBASIC12.15□□□□□ -0.46
CCL13Q99616 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC12.15□□□□□ -0.46
CCL13Q99616 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC12.15□□□□□ -0.46
CCL13Q99616 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.15□□□□□ -0.46
CCL13Q99616 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms