Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM47Q96LD4 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM47Q96LD4 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM47Q96LD4 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TRIM47Q96LD4 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM47Q96LD4 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TRIM47Q96LD4 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC16.96■□□□□ 0.31
TRIM47Q96LD4 MIR557-201ENST00000385239 98 ntBASIC16.96■□□□□ 0.31
TRIM47Q96LD4 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
TRIM47Q96LD4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
TRIM47Q96LD4 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC16.96■□□□□ 0.31
TRIM47Q96LD4 CHCHD2P9-201ENST00000461726 456 ntBASIC16.96■□□□□ 0.31
TRIM47Q96LD4 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC16.96■□□□□ 0.31
TRIM47Q96LD4 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC16.96■□□□□ 0.31
TRIM47Q96LD4 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.96■□□□□ 0.31
TRIM47Q96LD4 SIGLEC18P-201ENST00000602271 909 ntBASIC16.96■□□□□ 0.31
TRIM47Q96LD4 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
TRIM47Q96LD4 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TRIM47Q96LD4 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM47Q96LD4 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC16.96■□□□□ 0.31
TRIM47Q96LD4 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC16.96■□□□□ 0.3
TRIM47Q96LD4 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM47Q96LD4 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM47Q96LD4 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM47Q96LD4 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM47Q96LD4 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM47Q96LD4 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM47Q96LD4 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
TRIM47Q96LD4 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM47Q96LD4 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM47Q96LD4 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM47Q96LD4 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
TRIM47Q96LD4 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM47Q96LD4 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.95■□□□□ 0.3
TRIM47Q96LD4 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM47Q96LD4 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM47Q96LD4 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
TRIM47Q96LD4 AC144522.1-201ENST00000625111 1658 ntBASIC16.95■□□□□ 0.3
TRIM47Q96LD4 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM47Q96LD4 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM47Q96LD4 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM47Q96LD4 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM47Q96LD4 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM47Q96LD4 AC140479.7-201ENST00000636301 2332 ntBASIC16.95■□□□□ 0.3
TRIM47Q96LD4 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM47Q96LD4 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM47Q96LD4 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM47Q96LD4 SERF2-206ENST00000409291 807 ntTSL 3 BASIC16.95■□□□□ 0.3
TRIM47Q96LD4 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC16.95■□□□□ 0.3
TRIM47Q96LD4 AC006122.1-201ENST00000493323 440 ntBASIC16.95■□□□□ 0.3
TRIM47Q96LD4 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC16.95■□□□□ 0.3
TRIM47Q96LD4 AP003398.1-201ENST00000531124 318 ntBASIC16.95■□□□□ 0.3
TRIM47Q96LD4 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.95■□□□□ 0.3
TRIM47Q96LD4 AC105137.3-201ENST00000617588 984 ntBASIC16.95■□□□□ 0.3
TRIM47Q96LD4 AC073911.3-201ENST00000624401 631 ntBASIC16.95■□□□□ 0.3
TRIM47Q96LD4 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM47Q96LD4 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM47Q96LD4 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM47Q96LD4 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM47Q96LD4 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM47Q96LD4 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM47Q96LD4 LINC01165-201ENST00000445190 1623 ntBASIC16.95■□□□□ 0.3
TRIM47Q96LD4 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TRIM47Q96LD4 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
TRIM47Q96LD4 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM47Q96LD4 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TRIM47Q96LD4 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM47Q96LD4 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM47Q96LD4 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM47Q96LD4 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM47Q96LD4 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TRIM47Q96LD4 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TRIM47Q96LD4 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM47Q96LD4 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM47Q96LD4 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM47Q96LD4 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM47Q96LD4 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM47Q96LD4 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM47Q96LD4 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM47Q96LD4 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC16.94■□□□□ 0.3
TRIM47Q96LD4 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM47Q96LD4 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM47Q96LD4 AL157407.1-201ENST00000435784 904 ntBASIC16.94■□□□□ 0.3
TRIM47Q96LD4 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
TRIM47Q96LD4 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM47Q96LD4 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM47Q96LD4 TMCO5B-205ENST00000530020 894 ntBASIC16.94■□□□□ 0.3
TRIM47Q96LD4 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM47Q96LD4 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM47Q96LD4 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM47Q96LD4 RNF146-211ENST00000609447 607 ntTSL 4 BASIC16.94■□□□□ 0.3
TRIM47Q96LD4 AC087392.5-201ENST00000612517 489 ntBASIC16.94■□□□□ 0.3
TRIM47Q96LD4 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM47Q96LD4 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM47Q96LD4 AC025262.2-201ENST00000623975 1056 ntBASIC16.94■□□□□ 0.3
TRIM47Q96LD4 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM47Q96LD4 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM47Q96LD4 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TRIM47Q96LD4 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM47Q96LD4 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms