Protein–RNA interactions for Protein: Q96L94

SNX22, Sorting nexin-22, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22Q96L94 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.33□□□□□ -0.44
SNX22Q96L94 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SNX22Q96L94 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
SNX22Q96L94 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SNX22Q96L94 MXI1-205ENST00000393134 889 ntTSL 2 BASIC12.33□□□□□ -0.44
SNX22Q96L94 MIR1202-201ENST00000408529 83 ntBASIC12.33□□□□□ -0.44
SNX22Q96L94 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
SNX22Q96L94 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC12.33□□□□□ -0.44
SNX22Q96L94 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC12.33□□□□□ -0.44
SNX22Q96L94 RPL7P3-201ENST00000441388 714 ntBASIC12.33□□□□□ -0.44
SNX22Q96L94 AC234783.1-201ENST00000441761 496 ntBASIC12.33□□□□□ -0.44
SNX22Q96L94 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.33□□□□□ -0.44
SNX22Q96L94 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC12.33□□□□□ -0.44
SNX22Q96L94 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.33□□□□□ -0.44
SNX22Q96L94 AP000812.2-201ENST00000538934 718 ntBASIC12.33□□□□□ -0.44
SNX22Q96L94 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SNX22Q96L94 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.33□□□□□ -0.44
SNX22Q96L94 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.33□□□□□ -0.44
SNX22Q96L94 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC12.33□□□□□ -0.44
SNX22Q96L94 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.33□□□□□ -0.44
SNX22Q96L94 ORC6-206ENST00000568364 888 ntTSL 5 BASIC12.33□□□□□ -0.44
SNX22Q96L94 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
SNX22Q96L94 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC12.33□□□□□ -0.44
SNX22Q96L94 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC12.33□□□□□ -0.44
SNX22Q96L94 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC12.33□□□□□ -0.44
SNX22Q96L94 AC008825.2-201ENST00000603374 718 ntBASIC12.33□□□□□ -0.44
SNX22Q96L94 ZACNP1-201ENST00000612259 710 ntBASIC12.33□□□□□ -0.44
SNX22Q96L94 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.33□□□□□ -0.44
SNX22Q96L94 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SNX22Q96L94 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SNX22Q96L94 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SNX22Q96L94 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SNX22Q96L94 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SNX22Q96L94 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SNX22Q96L94 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SNX22Q96L94 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SNX22Q96L94 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12.33□□□□□ -0.44
SNX22Q96L94 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.33□□□□□ -0.44
SNX22Q96L94 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SNX22Q96L94 AC089987.1-201ENST00000551654 2209 ntBASIC12.33□□□□□ -0.44
SNX22Q96L94 PPT1-213ENST00000641319 2388 ntBASIC12.33□□□□□ -0.44
SNX22Q96L94 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.33□□□□□ -0.44
SNX22Q96L94 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SNX22Q96L94 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.32□□□□□ -0.44
SNX22Q96L94 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SNX22Q96L94 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.32□□□□□ -0.44
SNX22Q96L94 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SNX22Q96L94 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SNX22Q96L94 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SNX22Q96L94 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.32□□□□□ -0.44
SNX22Q96L94 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
SNX22Q96L94 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.32□□□□□ -0.44
SNX22Q96L94 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
SNX22Q96L94 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.32□□□□□ -0.44
SNX22Q96L94 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.32□□□□□ -0.44
SNX22Q96L94 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.32□□□□□ -0.44
SNX22Q96L94 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.32□□□□□ -0.44
SNX22Q96L94 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SNX22Q96L94 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SNX22Q96L94 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SNX22Q96L94 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SNX22Q96L94 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.32□□□□□ -0.44
SNX22Q96L94 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SNX22Q96L94 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SNX22Q96L94 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SNX22Q96L94 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SNX22Q96L94 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SNX22Q96L94 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SNX22Q96L94 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC12.32□□□□□ -0.44
SNX22Q96L94 AL035414.1-201ENST00000451327 857 ntBASIC12.32□□□□□ -0.44
SNX22Q96L94 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SNX22Q96L94 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SNX22Q96L94 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SNX22Q96L94 AP003171.2-201ENST00000528208 925 ntBASIC12.32□□□□□ -0.44
SNX22Q96L94 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SNX22Q96L94 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.32□□□□□ -0.44
SNX22Q96L94 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC12.32□□□□□ -0.44
SNX22Q96L94 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC12.32□□□□□ -0.44
SNX22Q96L94 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC12.32□□□□□ -0.44
SNX22Q96L94 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.32□□□□□ -0.44
SNX22Q96L94 AL162274.1-201ENST00000617191 1098 ntBASIC12.32□□□□□ -0.44
SNX22Q96L94 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SNX22Q96L94 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SNX22Q96L94 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.32□□□□□ -0.44
SNX22Q96L94 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SNX22Q96L94 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC12.32□□□□□ -0.44
SNX22Q96L94 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.32□□□□□ -0.44
SNX22Q96L94 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.32□□□□□ -0.44
SNX22Q96L94 KHSRPP1-201ENST00000427983 1768 ntBASIC12.32□□□□□ -0.44
SNX22Q96L94 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SNX22Q96L94 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
SNX22Q96L94 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SNX22Q96L94 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SNX22Q96L94 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SNX22Q96L94 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
SNX22Q96L94 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SNX22Q96L94 AC090505.1-201ENST00000430515 1834 ntBASIC12.32□□□□□ -0.44
SNX22Q96L94 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.32□□□□□ -0.44
SNX22Q96L94 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.32□□□□□ -0.44
SNX22Q96L94 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms