Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CLDN23Q96B33 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CLDN23Q96B33 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN23Q96B33 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN23Q96B33 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN23Q96B33 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
CLDN23Q96B33 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN23Q96B33 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN23Q96B33 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.19□□□□□ -0.14
CLDN23Q96B33 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN23Q96B33 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.19□□□□□ -0.14
CLDN23Q96B33 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CLDN23Q96B33 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN23Q96B33 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN23Q96B33 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
CLDN23Q96B33 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN23Q96B33 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.19□□□□□ -0.14
CLDN23Q96B33 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN23Q96B33 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN23Q96B33 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN23Q96B33 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC14.19□□□□□ -0.14
CLDN23Q96B33 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN23Q96B33 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CLDN23Q96B33 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CLDN23Q96B33 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN23Q96B33 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN23Q96B33 SIRPB3P-201ENST00000340424 1216 ntBASIC14.19□□□□□ -0.14
CLDN23Q96B33 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN23Q96B33 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC14.19□□□□□ -0.14
CLDN23Q96B33 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC14.19□□□□□ -0.14
CLDN23Q96B33 AC103592.1-201ENST00000394513 664 ntBASIC14.19□□□□□ -0.14
CLDN23Q96B33 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CLDN23Q96B33 ACTBP14-201ENST00000411655 1089 ntBASIC14.19□□□□□ -0.14
CLDN23Q96B33 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC14.19□□□□□ -0.14
CLDN23Q96B33 GOLGA6L16P-201ENST00000441780 1299 ntBASIC14.19□□□□□ -0.14
CLDN23Q96B33 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC14.19□□□□□ -0.14
CLDN23Q96B33 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN23Q96B33 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN23Q96B33 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC14.19□□□□□ -0.14
CLDN23Q96B33 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC14.19□□□□□ -0.14
CLDN23Q96B33 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC14.19□□□□□ -0.14
CLDN23Q96B33 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN23Q96B33 PHF23-213ENST00000613632 850 ntTSL 5 BASIC14.19□□□□□ -0.14
CLDN23Q96B33 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN23Q96B33 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.19□□□□□ -0.14
CLDN23Q96B33 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.19□□□□□ -0.14
CLDN23Q96B33 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC14.19□□□□□ -0.14
CLDN23Q96B33 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN23Q96B33 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN23Q96B33 AC215219.1-201ENST00000400706 1817 ntBASIC14.19□□□□□ -0.14
CLDN23Q96B33 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CLDN23Q96B33 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN23Q96B33 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN23Q96B33 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN23Q96B33 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CLDN23Q96B33 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN23Q96B33 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN23Q96B33 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN23Q96B33 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.19□□□□□ -0.14
CLDN23Q96B33 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN23Q96B33 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN23Q96B33 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CLDN23Q96B33 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN23Q96B33 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN23Q96B33 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN23Q96B33 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN23Q96B33 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN23Q96B33 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN23Q96B33 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CLDN23Q96B33 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
CLDN23Q96B33 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.18□□□□□ -0.14
CLDN23Q96B33 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN23Q96B33 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN23Q96B33 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CLDN23Q96B33 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN23Q96B33 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN23Q96B33 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN23Q96B33 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN23Q96B33 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN23Q96B33 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.18□□□□□ -0.14
CLDN23Q96B33 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN23Q96B33 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN23Q96B33 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.18□□□□□ -0.14
CLDN23Q96B33 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CLDN23Q96B33 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
CLDN23Q96B33 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN23Q96B33 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN23Q96B33 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN23Q96B33 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC14.18□□□□□ -0.14
CLDN23Q96B33 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC14.18□□□□□ -0.14
CLDN23Q96B33 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC14.18□□□□□ -0.14
CLDN23Q96B33 ALG1L7P-201ENST00000502317 768 ntBASIC14.18□□□□□ -0.14
CLDN23Q96B33 GOLGA2P8-201ENST00000505201 779 ntBASIC14.18□□□□□ -0.14
CLDN23Q96B33 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC14.18□□□□□ -0.14
CLDN23Q96B33 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC14.18□□□□□ -0.14
CLDN23Q96B33 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN23Q96B33 AC004801.1-201ENST00000549557 360 ntBASIC14.18□□□□□ -0.14
CLDN23Q96B33 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC14.18□□□□□ -0.14
CLDN23Q96B33 MT3-202ENST00000561640 514 ntTSL 3 BASIC14.18□□□□□ -0.14
CLDN23Q96B33 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms