Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
HPS1Q92902 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.47□□□□□ -0.25
HPS1Q92902 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HPS1Q92902 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HPS1Q92902 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HPS1Q92902 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
HPS1Q92902 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HPS1Q92902 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HPS1Q92902 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
HPS1Q92902 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HPS1Q92902 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC13.47□□□□□ -0.25
HPS1Q92902 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HPS1Q92902 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HPS1Q92902 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HPS1Q92902 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
HPS1Q92902 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HPS1Q92902 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.47□□□□□ -0.25
HPS1Q92902 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC13.47□□□□□ -0.25
HPS1Q92902 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HPS1Q92902 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HPS1Q92902 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HPS1Q92902 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HPS1Q92902 USO1-201ENST00000264904 4135 ntTSL 2 BASIC13.46□□□□□ -0.25
HPS1Q92902 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
HPS1Q92902 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HPS1Q92902 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HPS1Q92902 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HPS1Q92902 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
HPS1Q92902 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HPS1Q92902 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HPS1Q92902 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
HPS1Q92902 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.46□□□□□ -0.25
HPS1Q92902 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HPS1Q92902 AC022497.1-201ENST00000624916 3691 ntBASIC13.46□□□□□ -0.25
HPS1Q92902 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HPS1Q92902 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HPS1Q92902 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.46□□□□□ -0.25
HPS1Q92902 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.46□□□□□ -0.25
HPS1Q92902 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HPS1Q92902 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
HPS1Q92902 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
HPS1Q92902 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.46□□□□□ -0.25
HPS1Q92902 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.46□□□□□ -0.25
HPS1Q92902 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.46□□□□□ -0.25
HPS1Q92902 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC13.46□□□□□ -0.25
HPS1Q92902 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.46□□□□□ -0.25
HPS1Q92902 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.46□□□□□ -0.25
HPS1Q92902 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC13.46□□□□□ -0.25
HPS1Q92902 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.46□□□□□ -0.25
HPS1Q92902 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.46□□□□□ -0.25
HPS1Q92902 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.46□□□□□ -0.25
HPS1Q92902 AC138969.3-201ENST00000546612 1459 ntBASIC13.46□□□□□ -0.25
HPS1Q92902 AC138932.2-201ENST00000548268 1459 ntBASIC13.46□□□□□ -0.25
HPS1Q92902 AC126755.4-201ENST00000549796 1459 ntBASIC13.46□□□□□ -0.25
HPS1Q92902 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HPS1Q92902 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HPS1Q92902 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
HPS1Q92902 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.46□□□□□ -0.26
HPS1Q92902 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HPS1Q92902 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HPS1Q92902 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.46□□□□□ -0.26
HPS1Q92902 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
HPS1Q92902 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.46□□□□□ -0.26
HPS1Q92902 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.46□□□□□ -0.26
HPS1Q92902 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.46□□□□□ -0.26
HPS1Q92902 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HPS1Q92902 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HPS1Q92902 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.46□□□□□ -0.26
HPS1Q92902 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
HPS1Q92902 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
HPS1Q92902 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.46□□□□□ -0.26
HPS1Q92902 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
HPS1Q92902 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
HPS1Q92902 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HPS1Q92902 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.45□□□□□ -0.26
HPS1Q92902 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC13.45□□□□□ -0.26
HPS1Q92902 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
HPS1Q92902 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HPS1Q92902 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HPS1Q92902 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HPS1Q92902 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
HPS1Q92902 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
HPS1Q92902 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HPS1Q92902 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
HPS1Q92902 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HPS1Q92902 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
HPS1Q92902 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HPS1Q92902 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
HPS1Q92902 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.45□□□□□ -0.26
HPS1Q92902 LMO3-212ENST00000535535 1488 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
HPS1Q92902 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
HPS1Q92902 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HPS1Q92902 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.45□□□□□ -0.26
HPS1Q92902 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HPS1Q92902 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC13.45□□□□□ -0.26
HPS1Q92902 AP006294.1-201ENST00000415407 339 ntBASIC13.45□□□□□ -0.26
HPS1Q92902 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HPS1Q92902 AL392088.1-201ENST00000428364 670 ntBASIC13.45□□□□□ -0.26
HPS1Q92902 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.45□□□□□ -0.26
HPS1Q92902 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms