Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 AC011498.7-201ENST00000624986 2027 ntBASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 STK16-202ENST00000409260 1493 ntTSL 5 BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 MIR1307-201ENST00000408840 149 ntBASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 NEMF-210ENST00000556672 590 ntTSL 2 BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 CADM1-221ENST00000612235 1042 ntTSL 5 BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 PKD1P6-201ENST00000343738 4769 ntBASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 AC104640.1-201ENST00000562617 2109 ntBASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
ALMS1Q8TCU4 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 CTLA4-201ENST00000295854 525 ntTSL 5 BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 AL627095.1-201ENST00000414775 321 ntBASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 AC079325.1-201ENST00000430386 857 ntBASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 RPL29P2-201ENST00000488409 460 ntBASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 PGR-210ENST00000619228 3038 ntTSL 5 BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 ALMS1P1-201ENST00000428767 921 ntBASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 AC007881.1-201ENST00000437460 187 ntBASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 SORD2P-201ENST00000558556 1069 ntBASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 COG6-212ENST00000630730 186 ntTSL 5 BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 AC097474.1-201ENST00000506481 1371 ntBASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 AC013268.4-201ENST00000637413 2228 ntBASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 NAT9-204ENST00000578822 839 ntTSL 3 BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 MIR4640-201ENST00000581824 90 ntBASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 AC010503.4-201ENST00000615487 688 ntBASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 HLA-DQB2-231ENST00000435145 2026 ntBASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
ALMS1Q8TCU4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms