Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
SHKBP1Q8TBC3 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SHKBP1Q8TBC3 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
SHKBP1Q8TBC3 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
SHKBP1Q8TBC3 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.21■□□□□ 0.02
SHKBP1Q8TBC3 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SHKBP1Q8TBC3 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SHKBP1Q8TBC3 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SHKBP1Q8TBC3 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 AC078991.1-201ENST00000437297 610 ntBASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 AC104784.1-201ENST00000473096 294 ntBASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 PGAM1P5-201ENST00000548011 764 ntBASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 AC092171.5-201ENST00000608012 942 ntBASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 COX6A1P2-201ENST00000620597 330 ntBASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 YRDCP1-201ENST00000621419 643 ntBASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 AC011491.1-203ENST00000637688 543 ntBASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.2■□□□□ 0.02
SHKBP1Q8TBC3 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 BX640514.1-201ENST00000583223 1918 ntBASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 AL583805.1-201ENST00000391389 531 ntBASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 BANF1P3-201ENST00000412556 261 ntBASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 AP000358.1-201ENST00000456260 156 ntBASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 NPM1P43-201ENST00000558669 786 ntBASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 AC087045.2-201ENST00000606279 1003 ntBASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.19■□□□□ 0.02
SHKBP1Q8TBC3 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms