Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 FABP5-202ENST00000396359 986 ntTSL 5 BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 AL353779.1-201ENST00000434793 351 ntBASIC12.6□□□□□ -0.39
BEST4Q8NFU0 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.6□□□□□ -0.39
BEST4Q8NFU0 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 AL138828.2-201ENST00000615812 383 ntBASIC12.6□□□□□ -0.39
BEST4Q8NFU0 SPDYE12P-201ENST00000618416 771 ntBASIC12.6□□□□□ -0.39
BEST4Q8NFU0 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 AC102953.2-201ENST00000609755 3026 ntBASIC12.6□□□□□ -0.39
BEST4Q8NFU0 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC12.6□□□□□ -0.39
BEST4Q8NFU0 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 AC011498.7-201ENST00000624986 2027 ntBASIC12.59□□□□□ -0.39
BEST4Q8NFU0 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.59□□□□□ -0.39
BEST4Q8NFU0 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BEST4Q8NFU0 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
BEST4Q8NFU0 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
BEST4Q8NFU0 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BEST4Q8NFU0 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms