Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SCUBE3Q8IX30 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SCUBE3Q8IX30 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SCUBE3Q8IX30 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SCUBE3Q8IX30 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SCUBE3Q8IX30 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SCUBE3Q8IX30 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.27■□□□□ 0.04
SCUBE3Q8IX30 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
SCUBE3Q8IX30 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SCUBE3Q8IX30 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SCUBE3Q8IX30 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SCUBE3Q8IX30 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.27■□□□□ 0.04
SCUBE3Q8IX30 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SCUBE3Q8IX30 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.27■□□□□ 0.04
SCUBE3Q8IX30 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.27■□□□□ 0.04
SCUBE3Q8IX30 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.27■□□□□ 0.04
SCUBE3Q8IX30 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SCUBE3Q8IX30 IFNA1-201ENST00000276927 863 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
SCUBE3Q8IX30 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC15.27■□□□□ 0.04
SCUBE3Q8IX30 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SCUBE3Q8IX30 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.27■□□□□ 0.04
SCUBE3Q8IX30 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
SCUBE3Q8IX30 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.27■□□□□ 0.04
SCUBE3Q8IX30 AC005740.2-201ENST00000511085 419 ntBASIC15.27■□□□□ 0.04
SCUBE3Q8IX30 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC15.27■□□□□ 0.04
SCUBE3Q8IX30 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.27■□□□□ 0.04
SCUBE3Q8IX30 FOS-206ENST00000555347 1280 ntTSL 2 BASIC15.27■□□□□ 0.04
SCUBE3Q8IX30 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.27■□□□□ 0.04
SCUBE3Q8IX30 SNORD3B-2-202ENST00000571722 791 ntBASIC15.27■□□□□ 0.04
SCUBE3Q8IX30 AL391001.1-201ENST00000602747 715 ntBASIC15.27■□□□□ 0.04
SCUBE3Q8IX30 AC090164.2-201ENST00000611487 516 ntBASIC15.27■□□□□ 0.04
SCUBE3Q8IX30 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SCUBE3Q8IX30 AC133540.1-201ENST00000620845 1019 ntBASIC15.27■□□□□ 0.04
SCUBE3Q8IX30 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SCUBE3Q8IX30 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SCUBE3Q8IX30 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SCUBE3Q8IX30 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SCUBE3Q8IX30 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
SCUBE3Q8IX30 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SCUBE3Q8IX30 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SCUBE3Q8IX30 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SCUBE3Q8IX30 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
SCUBE3Q8IX30 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
SCUBE3Q8IX30 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SCUBE3Q8IX30 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.27■□□□□ 0.03
SCUBE3Q8IX30 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SCUBE3Q8IX30 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SCUBE3Q8IX30 AC020910.6-201ENST00000623084 1459 ntBASIC15.27■□□□□ 0.03
SCUBE3Q8IX30 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.27■□□□□ 0.03
SCUBE3Q8IX30 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SCUBE3Q8IX30 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.27■□□□□ 0.03
SCUBE3Q8IX30 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.27■□□□□ 0.03
SCUBE3Q8IX30 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.26■□□□□ 0.03
SCUBE3Q8IX30 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SCUBE3Q8IX30 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SCUBE3Q8IX30 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SCUBE3Q8IX30 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCUBE3Q8IX30 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SCUBE3Q8IX30 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.26■□□□□ 0.03
SCUBE3Q8IX30 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.26■□□□□ 0.03
SCUBE3Q8IX30 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC15.26■□□□□ 0.03
SCUBE3Q8IX30 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCUBE3Q8IX30 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SCUBE3Q8IX30 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.26■□□□□ 0.03
SCUBE3Q8IX30 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.26■□□□□ 0.03
SCUBE3Q8IX30 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.26■□□□□ 0.03
SCUBE3Q8IX30 KRT8P13-201ENST00000463294 1010 ntBASIC15.26■□□□□ 0.03
SCUBE3Q8IX30 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SCUBE3Q8IX30 AC003686.1-201ENST00000550956 1034 ntBASIC15.26■□□□□ 0.03
SCUBE3Q8IX30 AL451050.2-201ENST00000606967 682 ntBASIC15.26■□□□□ 0.03
SCUBE3Q8IX30 AP000346.4-201ENST00000614827 381 ntBASIC15.26■□□□□ 0.03
SCUBE3Q8IX30 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SCUBE3Q8IX30 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCUBE3Q8IX30 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCUBE3Q8IX30 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.26■□□□□ 0.03
SCUBE3Q8IX30 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCUBE3Q8IX30 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.26■□□□□ 0.03
SCUBE3Q8IX30 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCUBE3Q8IX30 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SCUBE3Q8IX30 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
SCUBE3Q8IX30 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SCUBE3Q8IX30 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.26■□□□□ 0.03
SCUBE3Q8IX30 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.26■□□□□ 0.03
SCUBE3Q8IX30 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCUBE3Q8IX30 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.26■□□□□ 0.03
SCUBE3Q8IX30 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.26■□□□□ 0.03
SCUBE3Q8IX30 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCUBE3Q8IX30 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCUBE3Q8IX30 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCUBE3Q8IX30 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SCUBE3Q8IX30 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.25■□□□□ 0.03
SCUBE3Q8IX30 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SCUBE3Q8IX30 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCUBE3Q8IX30 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SCUBE3Q8IX30 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCUBE3Q8IX30 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCUBE3Q8IX30 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.25■□□□□ 0.03
SCUBE3Q8IX30 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.25■□□□□ 0.03
SCUBE3Q8IX30 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
SCUBE3Q8IX30 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms