Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDKL3Q8IVW4 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDKL3Q8IVW4 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 CROCCP4-201ENST00000457096 498 ntBASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 AC023310.1-201ENST00000554836 735 ntBASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 DUX4L46-201ENST00000566845 751 ntBASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 AC105233.6-201ENST00000642093 218 ntBASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 AC023794.5-201ENST00000564380 2157 ntBASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 E2F3P2-201ENST00000447755 1422 ntBASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDKL3Q8IVW4 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 AL157996.1-201ENST00000624684 2299 ntBASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 AL645933.1-201ENST00000440087 609 ntBASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 CR383656.12-201ENST00000549567 513 ntBASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 MIR6720-201ENST00000611664 98 ntBASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 TMBIM7P-202ENST00000641474 1516 ntBASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDKL3Q8IVW4 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.89□□□□□ -0.03
CDKL3Q8IVW4 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms