Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
COL23A1Q86Y22 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC17.76■□□□□ 0.43
COL23A1Q86Y22 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC17.76■□□□□ 0.43
COL23A1Q86Y22 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.76■□□□□ 0.43
COL23A1Q86Y22 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
COL23A1Q86Y22 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL23A1Q86Y22 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL23A1Q86Y22 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL23A1Q86Y22 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL23A1Q86Y22 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC17.76■□□□□ 0.43
COL23A1Q86Y22 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL23A1Q86Y22 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC17.76■□□□□ 0.43
COL23A1Q86Y22 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL23A1Q86Y22 OLA1P2-201ENST00000395519 1264 ntBASIC17.76■□□□□ 0.43
COL23A1Q86Y22 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL23A1Q86Y22 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC17.76■□□□□ 0.43
COL23A1Q86Y22 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC17.76■□□□□ 0.43
COL23A1Q86Y22 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC17.76■□□□□ 0.43
COL23A1Q86Y22 AC133141.1-201ENST00000443015 339 ntBASIC17.76■□□□□ 0.43
COL23A1Q86Y22 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL23A1Q86Y22 TPT1P6-201ENST00000458298 514 ntBASIC17.76■□□□□ 0.43
COL23A1Q86Y22 HNRNPA3P6-201ENST00000472163 1006 ntBASIC17.76■□□□□ 0.43
COL23A1Q86Y22 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
COL23A1Q86Y22 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC17.76■□□□□ 0.43
COL23A1Q86Y22 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC17.76■□□□□ 0.43
COL23A1Q86Y22 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL23A1Q86Y22 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC17.76■□□□□ 0.43
COL23A1Q86Y22 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC17.76■□□□□ 0.43
COL23A1Q86Y22 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC17.76■□□□□ 0.43
COL23A1Q86Y22 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC17.76■□□□□ 0.43
COL23A1Q86Y22 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC17.76■□□□□ 0.43
COL23A1Q86Y22 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC17.76■□□□□ 0.43
COL23A1Q86Y22 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL23A1Q86Y22 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL23A1Q86Y22 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL23A1Q86Y22 AMT-256ENST00000638063 1783 ntTSL 5 BASIC17.76■□□□□ 0.43
COL23A1Q86Y22 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL23A1Q86Y22 RPL13AP3-202ENST00000494676 1473 ntBASIC17.75■□□□□ 0.43
COL23A1Q86Y22 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL23A1Q86Y22 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
COL23A1Q86Y22 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL23A1Q86Y22 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL23A1Q86Y22 SHMT1P1-201ENST00000419974 1312 ntBASIC17.75■□□□□ 0.43
COL23A1Q86Y22 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL23A1Q86Y22 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL23A1Q86Y22 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
COL23A1Q86Y22 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL23A1Q86Y22 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL23A1Q86Y22 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
COL23A1Q86Y22 HDGF-202ENST00000368206 960 ntTSL 5 BASIC17.75■□□□□ 0.43
COL23A1Q86Y22 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC17.75■□□□□ 0.43
COL23A1Q86Y22 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL23A1Q86Y22 HLA-DMA-202ENST00000395303 1007 ntBASIC17.75■□□□□ 0.43
COL23A1Q86Y22 TBC1D3P6-201ENST00000505954 962 ntBASIC17.75■□□□□ 0.43
COL23A1Q86Y22 AC004923.3-201ENST00000527532 355 ntBASIC17.75■□□□□ 0.43
COL23A1Q86Y22 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC17.75■□□□□ 0.43
COL23A1Q86Y22 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
COL23A1Q86Y22 AL050341.2-201ENST00000567508 1541 ntBASIC17.75■□□□□ 0.43
COL23A1Q86Y22 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL23A1Q86Y22 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
COL23A1Q86Y22 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL23A1Q86Y22 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.75■□□□□ 0.43
COL23A1Q86Y22 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL23A1Q86Y22 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
COL23A1Q86Y22 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL23A1Q86Y22 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL23A1Q86Y22 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.74■□□□□ 0.43
COL23A1Q86Y22 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC17.74■□□□□ 0.43
COL23A1Q86Y22 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
COL23A1Q86Y22 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
COL23A1Q86Y22 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL23A1Q86Y22 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.74■□□□□ 0.43
COL23A1Q86Y22 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL23A1Q86Y22 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
COL23A1Q86Y22 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL23A1Q86Y22 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
COL23A1Q86Y22 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL23A1Q86Y22 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL23A1Q86Y22 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.74■□□□□ 0.43
COL23A1Q86Y22 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL23A1Q86Y22 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL23A1Q86Y22 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL23A1Q86Y22 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL23A1Q86Y22 GH1-203ENST00000351388 685 ntTSL 2 BASIC17.74■□□□□ 0.43
COL23A1Q86Y22 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC17.74■□□□□ 0.43
COL23A1Q86Y22 CASP2-203ENST00000392925 616 ntTSL 3 BASIC17.74■□□□□ 0.43
COL23A1Q86Y22 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL23A1Q86Y22 ACTBP14-201ENST00000411655 1089 ntBASIC17.74■□□□□ 0.43
COL23A1Q86Y22 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC17.74■□□□□ 0.43
COL23A1Q86Y22 AC103563.1-201ENST00000429316 123 ntBASIC17.74■□□□□ 0.43
COL23A1Q86Y22 AC092810.2-201ENST00000431570 362 ntBASIC17.74■□□□□ 0.43
COL23A1Q86Y22 AL136084.1-201ENST00000449172 318 ntBASIC17.74■□□□□ 0.43
COL23A1Q86Y22 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC17.74■□□□□ 0.43
COL23A1Q86Y22 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC17.74■□□□□ 0.43
COL23A1Q86Y22 AC142086.5-202ENST00000562500 217 ntBASIC17.74■□□□□ 0.43
COL23A1Q86Y22 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC17.74■□□□□ 0.43
COL23A1Q86Y22 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC17.74■□□□□ 0.43
COL23A1Q86Y22 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC17.74■□□□□ 0.43
COL23A1Q86Y22 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL23A1Q86Y22 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms