Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LRRC28Q86X40 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LRRC28Q86X40 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.99□□□□□ -0.33
LRRC28Q86X40 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LRRC28Q86X40 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
LRRC28Q86X40 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
LRRC28Q86X40 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LRRC28Q86X40 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.99□□□□□ -0.33
LRRC28Q86X40 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LRRC28Q86X40 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
LRRC28Q86X40 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.99□□□□□ -0.33
LRRC28Q86X40 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRRC28Q86X40 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
LRRC28Q86X40 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LRRC28Q86X40 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRRC28Q86X40 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LRRC28Q86X40 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.98□□□□□ -0.33
LRRC28Q86X40 MYADML-201ENST00000474610 2147 ntBASIC12.98□□□□□ -0.33
LRRC28Q86X40 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRRC28Q86X40 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LRRC28Q86X40 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
LRRC28Q86X40 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRRC28Q86X40 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LRRC28Q86X40 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LRRC28Q86X40 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
LRRC28Q86X40 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LRRC28Q86X40 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LRRC28Q86X40 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRRC28Q86X40 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC12.98□□□□□ -0.33
LRRC28Q86X40 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.98□□□□□ -0.33
LRRC28Q86X40 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.98□□□□□ -0.33
LRRC28Q86X40 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.98□□□□□ -0.33
LRRC28Q86X40 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.98□□□□□ -0.33
LRRC28Q86X40 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRRC28Q86X40 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.98□□□□□ -0.33
LRRC28Q86X40 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRRC28Q86X40 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.98□□□□□ -0.33
LRRC28Q86X40 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRRC28Q86X40 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRRC28Q86X40 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRRC28Q86X40 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC12.98□□□□□ -0.33
LRRC28Q86X40 NAA50-208ENST00000497255 789 ntTSL 5 BASIC12.98□□□□□ -0.33
LRRC28Q86X40 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC12.98□□□□□ -0.33
LRRC28Q86X40 GAPDHP40-201ENST00000505218 1006 ntBASIC12.98□□□□□ -0.33
LRRC28Q86X40 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.98□□□□□ -0.33
LRRC28Q86X40 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC12.98□□□□□ -0.33
LRRC28Q86X40 AC106886.1-201ENST00000568660 600 ntBASIC12.98□□□□□ -0.33
LRRC28Q86X40 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.98□□□□□ -0.33
LRRC28Q86X40 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
LRRC28Q86X40 PIGL-212ENST00000581006 554 ntTSL 4 BASIC12.98□□□□□ -0.33
LRRC28Q86X40 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
LRRC28Q86X40 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
LRRC28Q86X40 AC010319.3-201ENST00000597028 470 ntBASIC12.98□□□□□ -0.33
LRRC28Q86X40 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRRC28Q86X40 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LRRC28Q86X40 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.98□□□□□ -0.33
LRRC28Q86X40 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.98□□□□□ -0.33
LRRC28Q86X40 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
LRRC28Q86X40 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
LRRC28Q86X40 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.98□□□□□ -0.33
LRRC28Q86X40 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
LRRC28Q86X40 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.98□□□□□ -0.33
LRRC28Q86X40 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRRC28Q86X40 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRRC28Q86X40 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.98□□□□□ -0.33
LRRC28Q86X40 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.98□□□□□ -0.33
LRRC28Q86X40 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRRC28Q86X40 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LRRC28Q86X40 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRRC28Q86X40 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
LRRC28Q86X40 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LRRC28Q86X40 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.98□□□□□ -0.33
LRRC28Q86X40 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
LRRC28Q86X40 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
LRRC28Q86X40 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LRRC28Q86X40 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRC28Q86X40 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRC28Q86X40 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRC28Q86X40 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRC28Q86X40 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.97□□□□□ -0.33
LRRC28Q86X40 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.97□□□□□ -0.33
LRRC28Q86X40 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRC28Q86X40 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
LRRC28Q86X40 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.97□□□□□ -0.33
LRRC28Q86X40 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LRRC28Q86X40 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
LRRC28Q86X40 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
LRRC28Q86X40 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
LRRC28Q86X40 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
LRRC28Q86X40 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRC28Q86X40 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRC28Q86X40 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LRRC28Q86X40 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LRRC28Q86X40 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LRRC28Q86X40 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.97□□□□□ -0.33
LRRC28Q86X40 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LRRC28Q86X40 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.97□□□□□ -0.33
LRRC28Q86X40 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC12.97□□□□□ -0.33
LRRC28Q86X40 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC12.97□□□□□ -0.33
LRRC28Q86X40 AC004066.1-201ENST00000502488 802 ntBASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms