Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 BX324167.2-201ENST00000623717 3316 ntBASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
FOXR1Q6PIV2 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
FOXR1Q6PIV2 REXO1L4P-201ENST00000605109 1937 ntBASIC15.21■□□□□ 0.03
FOXR1Q6PIV2 AC020910.6-201ENST00000623084 1459 ntBASIC15.21■□□□□ 0.03
FOXR1Q6PIV2 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FOXR1Q6PIV2 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FOXR1Q6PIV2 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
FOXR1Q6PIV2 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FOXR1Q6PIV2 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.21■□□□□ 0.03
FOXR1Q6PIV2 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FOXR1Q6PIV2 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.03
FOXR1Q6PIV2 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
FOXR1Q6PIV2 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.21■□□□□ 0.03
FOXR1Q6PIV2 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
FOXR1Q6PIV2 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
FOXR1Q6PIV2 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
FOXR1Q6PIV2 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
FOXR1Q6PIV2 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.21■□□□□ 0.03
FOXR1Q6PIV2 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FOXR1Q6PIV2 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
FOXR1Q6PIV2 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.21■□□□□ 0.03
FOXR1Q6PIV2 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
FOXR1Q6PIV2 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
FOXR1Q6PIV2 SERPINA7P1-201ENST00000443077 631 ntBASIC15.21■□□□□ 0.03
FOXR1Q6PIV2 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.21■□□□□ 0.03
FOXR1Q6PIV2 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.21■□□□□ 0.03
FOXR1Q6PIV2 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.21■□□□□ 0.03
FOXR1Q6PIV2 AL606495.2-201ENST00000605867 535 ntBASIC15.21■□□□□ 0.03
FOXR1Q6PIV2 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.21■□□□□ 0.03
FOXR1Q6PIV2 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.21■□□□□ 0.03
FOXR1Q6PIV2 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FOXR1Q6PIV2 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
FOXR1Q6PIV2 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.21■□□□□ 0.03
FOXR1Q6PIV2 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
FOXR1Q6PIV2 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC15.21■□□□□ 0.03
FOXR1Q6PIV2 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
FOXR1Q6PIV2 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.21■□□□□ 0.02
FOXR1Q6PIV2 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
FOXR1Q6PIV2 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
FOXR1Q6PIV2 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
FOXR1Q6PIV2 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
FOXR1Q6PIV2 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.21■□□□□ 0.02
FOXR1Q6PIV2 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC15.21■□□□□ 0.02
FOXR1Q6PIV2 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
FOXR1Q6PIV2 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 AL022323.5-201ENST00000624101 2059 ntBASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 AZGP1P1-201ENST00000411909 902 ntBASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 AL022328.1-201ENST00000610050 478 ntBASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 SNX12-206ENST00000622259 661 ntTSL 5 BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FOXR1Q6PIV2 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms