Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 AC011997.1-201ENST00000409845 1032 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 GRPEL2P1-201ENST00000453145 339 ntBASIC13.78□□□□□ -0.2
RIF1Q5UIP0 CAP2-207ENST00000493172 861 ntTSL 2 BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.78□□□□□ -0.2
RIF1Q5UIP0 HNRNPA1P72-201ENST00000529511 967 ntBASIC13.78□□□□□ -0.2
RIF1Q5UIP0 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 AC008764.4-207ENST00000600705 956 ntTSL 2 BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 AL031590.1-202ENST00000641466 1737 ntBASIC13.78□□□□□ -0.2
RIF1Q5UIP0 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 ACTBP14-201ENST00000411655 1089 ntBASIC13.78□□□□□ -0.2
RIF1Q5UIP0 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 AC007679.1-201ENST00000458609 502 ntBASIC13.78□□□□□ -0.2
RIF1Q5UIP0 ALG10-202ENST00000538927 571 ntTSL 5 BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC13.78□□□□□ -0.2
RIF1Q5UIP0 MIR6165-201ENST00000614803 84 ntBASIC13.78□□□□□ -0.2
RIF1Q5UIP0 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
RIF1Q5UIP0 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
RIF1Q5UIP0 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
RIF1Q5UIP0 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
RIF1Q5UIP0 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RIF1Q5UIP0 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
RIF1Q5UIP0 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RIF1Q5UIP0 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RIF1Q5UIP0 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
RIF1Q5UIP0 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RIF1Q5UIP0 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
RIF1Q5UIP0 CACNB4-201ENST00000201943 1389 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
RIF1Q5UIP0 TSGA13-201ENST00000356588 1372 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
RIF1Q5UIP0 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC13.77□□□□□ -0.21
RIF1Q5UIP0 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RIF1Q5UIP0 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
RIF1Q5UIP0 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RIF1Q5UIP0 VGLL1-201ENST00000370634 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RIF1Q5UIP0 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC13.77□□□□□ -0.21
RIF1Q5UIP0 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC13.77□□□□□ -0.21
RIF1Q5UIP0 OR52X1P-201ENST00000446117 914 ntBASIC13.77□□□□□ -0.21
RIF1Q5UIP0 AC069421.1-201ENST00000447462 323 ntBASIC13.77□□□□□ -0.21
RIF1Q5UIP0 PSME2P2-201ENST00000453033 700 ntBASIC13.77□□□□□ -0.21
RIF1Q5UIP0 GYG1-209ENST00000483267 801 ntTSL 2 BASIC13.77□□□□□ -0.21
RIF1Q5UIP0 AC099343.1-201ENST00000513481 609 ntBASIC13.77□□□□□ -0.21
RIF1Q5UIP0 RPL10P8-201ENST00000522888 313 ntBASIC13.77□□□□□ -0.21
RIF1Q5UIP0 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
RIF1Q5UIP0 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RIF1Q5UIP0 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RIF1Q5UIP0 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RIF1Q5UIP0 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RIF1Q5UIP0 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC13.77□□□□□ -0.21
RIF1Q5UIP0 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
RIF1Q5UIP0 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RIF1Q5UIP0 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RIF1Q5UIP0 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RIF1Q5UIP0 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RIF1Q5UIP0 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC13.77□□□□□ -0.21
RIF1Q5UIP0 LTB4R2-202ENST00000528054 3092 ntBASIC13.77□□□□□ -0.21
RIF1Q5UIP0 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.77□□□□□ -0.21
RIF1Q5UIP0 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC13.77□□□□□ -0.21
RIF1Q5UIP0 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RIF1Q5UIP0 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms