Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC15.47■□□□□ 0.07
CTC1Q2NKJ3 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC15.47■□□□□ 0.07
CTC1Q2NKJ3 AC005041.3-201ENST00000606287 649 ntBASIC15.47■□□□□ 0.07
CTC1Q2NKJ3 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
CTC1Q2NKJ3 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.47■□□□□ 0.07
CTC1Q2NKJ3 LINC01815-202ENST00000641468 1409 ntBASIC15.47■□□□□ 0.07
CTC1Q2NKJ3 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CTC1Q2NKJ3 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CTC1Q2NKJ3 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CTC1Q2NKJ3 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CTC1Q2NKJ3 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CTC1Q2NKJ3 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CTC1Q2NKJ3 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CTC1Q2NKJ3 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CTC1Q2NKJ3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CTC1Q2NKJ3 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.47■□□□□ 0.07
CTC1Q2NKJ3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CTC1Q2NKJ3 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CTC1Q2NKJ3 LINC01230-201ENST00000625222 3017 ntBASIC15.46■□□□□ 0.07
CTC1Q2NKJ3 AC012508.2-201ENST00000567613 1472 ntBASIC15.46■□□□□ 0.07
CTC1Q2NKJ3 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.46■□□□□ 0.07
CTC1Q2NKJ3 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CTC1Q2NKJ3 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.46■□□□□ 0.07
CTC1Q2NKJ3 AC018629.1-201ENST00000623381 1736 ntBASIC15.46■□□□□ 0.07
CTC1Q2NKJ3 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CTC1Q2NKJ3 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CTC1Q2NKJ3 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CTC1Q2NKJ3 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.46■□□□□ 0.07
CTC1Q2NKJ3 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.46■□□□□ 0.07
CTC1Q2NKJ3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CTC1Q2NKJ3 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.46■□□□□ 0.07
CTC1Q2NKJ3 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CTC1Q2NKJ3 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CTC1Q2NKJ3 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CTC1Q2NKJ3 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CTC1Q2NKJ3 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CTC1Q2NKJ3 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CTC1Q2NKJ3 AC004837.1-201ENST00000446267 564 ntBASIC15.46■□□□□ 0.07
CTC1Q2NKJ3 AGPAT5P1-201ENST00000455855 1019 ntBASIC15.46■□□□□ 0.07
CTC1Q2NKJ3 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC15.46■□□□□ 0.07
CTC1Q2NKJ3 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC15.46■□□□□ 0.07
CTC1Q2NKJ3 MIR3180-2-201ENST00000581748 88 ntBASIC15.46■□□□□ 0.07
CTC1Q2NKJ3 DBP-202ENST00000593500 712 ntTSL 2 BASIC15.46■□□□□ 0.07
CTC1Q2NKJ3 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC15.46■□□□□ 0.07
CTC1Q2NKJ3 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC15.46■□□□□ 0.07
CTC1Q2NKJ3 AC006158.1-201ENST00000610661 249 ntBASIC15.46■□□□□ 0.07
CTC1Q2NKJ3 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC15.46■□□□□ 0.07
CTC1Q2NKJ3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CTC1Q2NKJ3 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.46■□□□□ 0.07
CTC1Q2NKJ3 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.46■□□□□ 0.07
CTC1Q2NKJ3 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CTC1Q2NKJ3 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CTC1Q2NKJ3 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CTC1Q2NKJ3 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CTC1Q2NKJ3 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC15.46■□□□□ 0.07
CTC1Q2NKJ3 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CTC1Q2NKJ3 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.46■□□□□ 0.06
CTC1Q2NKJ3 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CTC1Q2NKJ3 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.46■□□□□ 0.06
CTC1Q2NKJ3 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
CTC1Q2NKJ3 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CTC1Q2NKJ3 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
CTC1Q2NKJ3 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.45■□□□□ 0.06
CTC1Q2NKJ3 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CTC1Q2NKJ3 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CTC1Q2NKJ3 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.45■□□□□ 0.06
CTC1Q2NKJ3 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC15.45■□□□□ 0.06
CTC1Q2NKJ3 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CTC1Q2NKJ3 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CTC1Q2NKJ3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CTC1Q2NKJ3 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CTC1Q2NKJ3 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CTC1Q2NKJ3 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CTC1Q2NKJ3 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CTC1Q2NKJ3 BEND3P1-201ENST00000421591 1944 ntBASIC15.45■□□□□ 0.06
CTC1Q2NKJ3 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.45■□□□□ 0.06
CTC1Q2NKJ3 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CTC1Q2NKJ3 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CTC1Q2NKJ3 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CTC1Q2NKJ3 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CTC1Q2NKJ3 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CTC1Q2NKJ3 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CTC1Q2NKJ3 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CTC1Q2NKJ3 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CTC1Q2NKJ3 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC15.45■□□□□ 0.06
CTC1Q2NKJ3 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CTC1Q2NKJ3 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CTC1Q2NKJ3 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CTC1Q2NKJ3 RNA5SP359-201ENST00000364838 113 ntBASIC15.45■□□□□ 0.06
CTC1Q2NKJ3 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CTC1Q2NKJ3 AC012497.1-201ENST00000429392 575 ntBASIC15.45■□□□□ 0.06
CTC1Q2NKJ3 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC15.45■□□□□ 0.06
CTC1Q2NKJ3 AREG-202ENST00000502307 956 ntTSL 5 BASIC15.45■□□□□ 0.06
CTC1Q2NKJ3 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CTC1Q2NKJ3 AC084752.1-201ENST00000509766 622 ntBASIC15.45■□□□□ 0.06
CTC1Q2NKJ3 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CTC1Q2NKJ3 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CTC1Q2NKJ3 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CTC1Q2NKJ3 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC15.45■□□□□ 0.06
CTC1Q2NKJ3 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms