Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC17.33■□□□□ 0.37
RFX7Q2KHR2 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
RFX7Q2KHR2 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RFX7Q2KHR2 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
RFX7Q2KHR2 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RFX7Q2KHR2 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFX7Q2KHR2 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFX7Q2KHR2 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFX7Q2KHR2 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFX7Q2KHR2 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC17.33■□□□□ 0.36
RFX7Q2KHR2 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC17.33■□□□□ 0.36
RFX7Q2KHR2 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC17.33■□□□□ 0.36
RFX7Q2KHR2 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RFX7Q2KHR2 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC17.33■□□□□ 0.36
RFX7Q2KHR2 NAT9-220ENST00000582870 896 ntTSL 5 BASIC17.33■□□□□ 0.36
RFX7Q2KHR2 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC17.33■□□□□ 0.36
RFX7Q2KHR2 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFX7Q2KHR2 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC17.33■□□□□ 0.36
RFX7Q2KHR2 MIR6727-201ENST00000620702 65 ntBASIC17.33■□□□□ 0.36
RFX7Q2KHR2 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC17.33■□□□□ 0.36
RFX7Q2KHR2 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC17.33■□□□□ 0.36
RFX7Q2KHR2 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFX7Q2KHR2 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
RFX7Q2KHR2 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFX7Q2KHR2 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
RFX7Q2KHR2 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFX7Q2KHR2 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
RFX7Q2KHR2 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RFX7Q2KHR2 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RFX7Q2KHR2 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC17.33■□□□□ 0.36
RFX7Q2KHR2 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
RFX7Q2KHR2 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFX7Q2KHR2 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFX7Q2KHR2 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFX7Q2KHR2 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFX7Q2KHR2 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC17.33■□□□□ 0.36
RFX7Q2KHR2 BEND3P1-201ENST00000421591 1944 ntBASIC17.33■□□□□ 0.36
RFX7Q2KHR2 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RFX7Q2KHR2 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 AC026320.2-201ENST00000434379 478 ntBASIC17.32■□□□□ 0.36
RFX7Q2KHR2 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 PARP8-206ENST00000503665 572 ntTSL 4 BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 AC093752.3-201ENST00000567343 901 ntBASIC17.32■□□□□ 0.36
RFX7Q2KHR2 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 AC005632.3-201ENST00000605544 308 ntBASIC17.32■□□□□ 0.36
RFX7Q2KHR2 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 MIR6769A-201ENST00000617340 73 ntBASIC17.32■□□□□ 0.36
RFX7Q2KHR2 AC011491.1-203ENST00000637688 543 ntBASIC17.32■□□□□ 0.36
RFX7Q2KHR2 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC17.32■□□□□ 0.36
RFX7Q2KHR2 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RFX7Q2KHR2 USP39-220ENST00000613444 2161 ntTSL 2 BASIC17.31■□□□□ 0.36
RFX7Q2KHR2 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFX7Q2KHR2 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFX7Q2KHR2 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFX7Q2KHR2 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RFX7Q2KHR2 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RFX7Q2KHR2 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFX7Q2KHR2 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFX7Q2KHR2 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RFX7Q2KHR2 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RFX7Q2KHR2 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC17.31■□□□□ 0.36
RFX7Q2KHR2 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC17.31■□□□□ 0.36
RFX7Q2KHR2 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RFX7Q2KHR2 AP000358.1-201ENST00000456260 156 ntBASIC17.31■□□□□ 0.36
RFX7Q2KHR2 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms