Protein–RNA interactions for Protein: Q07343

PDE4B, cAMP-specific 3',5'-cyclic phosphodiesterase 4B, humanhuman

Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4BQ07343 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
PDE4BQ07343 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE4BQ07343 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PDE4BQ07343 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE4BQ07343 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC17.1■□□□□ 0.33
PDE4BQ07343 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PDE4BQ07343 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE4BQ07343 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17.1■□□□□ 0.33
PDE4BQ07343 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC17.1■□□□□ 0.33
PDE4BQ07343 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC17.1■□□□□ 0.33
PDE4BQ07343 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC17.1■□□□□ 0.33
PDE4BQ07343 AC245884.6-201ENST00000515672 1067 ntBASIC17.1■□□□□ 0.33
PDE4BQ07343 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC17.1■□□□□ 0.33
PDE4BQ07343 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC17.1■□□□□ 0.33
PDE4BQ07343 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC17.1■□□□□ 0.33
PDE4BQ07343 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE4BQ07343 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE4BQ07343 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PDE4BQ07343 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDE4BQ07343 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE4BQ07343 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDE4BQ07343 WARS-203ENST00000358655 2466 ntTSL 2 BASIC17.1■□□□□ 0.33
PDE4BQ07343 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE4BQ07343 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC17.1■□□□□ 0.33
PDE4BQ07343 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE4BQ07343 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE4BQ07343 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE4BQ07343 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC17.1■□□□□ 0.33
PDE4BQ07343 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDE4BQ07343 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC17.09■□□□□ 0.33
PDE4BQ07343 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PDE4BQ07343 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE4BQ07343 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC17.09■□□□□ 0.33
PDE4BQ07343 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE4BQ07343 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC17.09■□□□□ 0.33
PDE4BQ07343 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC17.09■□□□□ 0.33
PDE4BQ07343 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC17.09■□□□□ 0.33
PDE4BQ07343 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC17.09■□□□□ 0.33
PDE4BQ07343 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC17.09■□□□□ 0.33
PDE4BQ07343 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.09■□□□□ 0.33
PDE4BQ07343 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC17.09■□□□□ 0.33
PDE4BQ07343 AL353637.1-201ENST00000451571 732 ntBASIC17.09■□□□□ 0.33
PDE4BQ07343 NUP210P1-202ENST00000504322 710 ntBASIC17.09■□□□□ 0.33
PDE4BQ07343 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC17.09■□□□□ 0.33
PDE4BQ07343 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDE4BQ07343 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC17.09■□□□□ 0.33
PDE4BQ07343 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE4BQ07343 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
PDE4BQ07343 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PDE4BQ07343 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC17.09■□□□□ 0.33
PDE4BQ07343 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PDE4BQ07343 LINC01165-201ENST00000445190 1623 ntBASIC17.09■□□□□ 0.33
PDE4BQ07343 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
PDE4BQ07343 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE4BQ07343 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
PDE4BQ07343 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PDE4BQ07343 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC17.09■□□□□ 0.33
PDE4BQ07343 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.09■□□□□ 0.33
PDE4BQ07343 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE4BQ07343 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PDE4BQ07343 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE4BQ07343 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PDE4BQ07343 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE4BQ07343 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE4BQ07343 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PDE4BQ07343 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDE4BQ07343 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
PDE4BQ07343 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDE4BQ07343 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDE4BQ07343 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC17.08■□□□□ 0.33
PDE4BQ07343 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PDE4BQ07343 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDE4BQ07343 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
PDE4BQ07343 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC17.08■□□□□ 0.33
PDE4BQ07343 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
PDE4BQ07343 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDE4BQ07343 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDE4BQ07343 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PDE4BQ07343 ABR-205ENST00000544583 5595 ntTSL 2 BASIC17.08■□□□□ 0.33
PDE4BQ07343 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PDE4BQ07343 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
PDE4BQ07343 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
PDE4BQ07343 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC17.08■□□□□ 0.32
PDE4BQ07343 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PDE4BQ07343 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDE4BQ07343 FRMPD2B-201ENST00000431305 1347 ntBASIC17.08■□□□□ 0.32
PDE4BQ07343 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDE4BQ07343 LBH-202ENST00000401506 485 ntTSL 3 BASIC17.08■□□□□ 0.32
PDE4BQ07343 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDE4BQ07343 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC17.08■□□□□ 0.32
PDE4BQ07343 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PDE4BQ07343 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC17.08■□□□□ 0.32
PDE4BQ07343 PFN2-206ENST00000461930 606 ntTSL 4 BASIC17.08■□□□□ 0.32
PDE4BQ07343 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.08■□□□□ 0.32
PDE4BQ07343 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC17.08■□□□□ 0.32
PDE4BQ07343 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC17.08■□□□□ 0.32
PDE4BQ07343 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.08■□□□□ 0.32
PDE4BQ07343 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC17.08■□□□□ 0.32
PDE4BQ07343 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
PDE4BQ07343 IRF3-215ENST00000596822 823 ntTSL 3 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms