Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.02□□□□□ -0.33
CAV3P56539 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.02□□□□□ -0.33
CAV3P56539 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CAV3P56539 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.33
CAV3P56539 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC13.02□□□□□ -0.33
CAV3P56539 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
CAV3P56539 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
CAV3P56539 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
CAV3P56539 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CAV3P56539 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CAV3P56539 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CAV3P56539 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CAV3P56539 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.02□□□□□ -0.33
CAV3P56539 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CAV3P56539 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CAV3P56539 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CAV3P56539 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CAV3P56539 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CAV3P56539 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CAV3P56539 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CAV3P56539 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.02□□□□□ -0.33
CAV3P56539 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CAV3P56539 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
CAV3P56539 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CAV3P56539 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CAV3P56539 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CAV3P56539 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
CAV3P56539 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
CAV3P56539 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CAV3P56539 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CAV3P56539 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.01□□□□□ -0.33
CAV3P56539 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.01□□□□□ -0.33
CAV3P56539 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CAV3P56539 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CAV3P56539 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.01□□□□□ -0.33
CAV3P56539 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CAV3P56539 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
CAV3P56539 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CAV3P56539 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CAV3P56539 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CAV3P56539 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CAV3P56539 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CAV3P56539 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
CAV3P56539 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CAV3P56539 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC13.01□□□□□ -0.33
CAV3P56539 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.01□□□□□ -0.33
CAV3P56539 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CAV3P56539 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CAV3P56539 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CAV3P56539 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CAV3P56539 SPTLC1P1-201ENST00000447199 261 ntBASIC13.01□□□□□ -0.33
CAV3P56539 SPDYE18-201ENST00000510091 1050 ntBASIC13.01□□□□□ -0.33
CAV3P56539 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.01□□□□□ -0.33
CAV3P56539 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CAV3P56539 TPRX2P-201ENST00000535362 881 ntBASIC13.01□□□□□ -0.33
CAV3P56539 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CAV3P56539 RRP7BP-205ENST00000566851 833 ntBASIC13.01□□□□□ -0.33
CAV3P56539 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.01□□□□□ -0.33
CAV3P56539 MIR4745-201ENST00000577608 62 ntBASIC13.01□□□□□ -0.33
CAV3P56539 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.01□□□□□ -0.33
CAV3P56539 AC008761.3-201ENST00000624803 892 ntBASIC13.01□□□□□ -0.33
CAV3P56539 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.01□□□□□ -0.33
CAV3P56539 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CAV3P56539 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.01□□□□□ -0.33
CAV3P56539 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CAV3P56539 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CAV3P56539 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.01□□□□□ -0.33
CAV3P56539 AL158070.2-201ENST00000623713 1621 ntBASIC13.01□□□□□ -0.33
CAV3P56539 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CAV3P56539 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.01□□□□□ -0.33
CAV3P56539 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CAV3P56539 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
CAV3P56539 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CAV3P56539 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
CAV3P56539 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CAV3P56539 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.01□□□□□ -0.33
CAV3P56539 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CAV3P56539 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CAV3P56539 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CAV3P56539 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
CAV3P56539 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.01□□□□□ -0.33
CAV3P56539 AGAP12P-201ENST00000585227 2359 ntBASIC13.01□□□□□ -0.33
CAV3P56539 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.01□□□□□ -0.33
CAV3P56539 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC13.01□□□□□ -0.33
CAV3P56539 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CAV3P56539 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CAV3P56539 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CAV3P56539 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CAV3P56539 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CAV3P56539 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
CAV3P56539 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CAV3P56539 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CAV3P56539 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CAV3P56539 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
CAV3P56539 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC13□□□□□ -0.33
CAV3P56539 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13□□□□□ -0.33
CAV3P56539 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CAV3P56539 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CAV3P56539 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CAV3P56539 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms