Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.1□□□□□ -0.15
PDX1P52945 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.1□□□□□ -0.15
PDX1P52945 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDX1P52945 CFL1-206ENST00000527344 962 ntTSL 2 BASIC14.1□□□□□ -0.15
PDX1P52945 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
PDX1P52945 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC14.1□□□□□ -0.15
PDX1P52945 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC14.1□□□□□ -0.15
PDX1P52945 AC087045.2-201ENST00000606279 1003 ntBASIC14.1□□□□□ -0.15
PDX1P52945 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC14.1□□□□□ -0.15
PDX1P52945 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDX1P52945 LINC01165-201ENST00000445190 1623 ntBASIC14.1□□□□□ -0.15
PDX1P52945 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PDX1P52945 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDX1P52945 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDX1P52945 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.1□□□□□ -0.15
PDX1P52945 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PDX1P52945 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.1□□□□□ -0.15
PDX1P52945 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PDX1P52945 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.1□□□□□ -0.15
PDX1P52945 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDX1P52945 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDX1P52945 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.1□□□□□ -0.15
PDX1P52945 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDX1P52945 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDX1P52945 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.1□□□□□ -0.15
PDX1P52945 FAM90A2P-201ENST00000511144 1395 ntBASIC14.09□□□□□ -0.15
PDX1P52945 FAM90A25P-201ENST00000528404 1395 ntBASIC14.09□□□□□ -0.15
PDX1P52945 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PDX1P52945 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PDX1P52945 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
PDX1P52945 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PDX1P52945 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
PDX1P52945 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDX1P52945 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDX1P52945 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.09□□□□□ -0.15
PDX1P52945 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
PDX1P52945 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.09□□□□□ -0.15
PDX1P52945 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDX1P52945 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
PDX1P52945 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.09□□□□□ -0.15
PDX1P52945 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDX1P52945 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDX1P52945 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDX1P52945 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDX1P52945 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PDX1P52945 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC14.09□□□□□ -0.15
PDX1P52945 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.09□□□□□ -0.15
PDX1P52945 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PDX1P52945 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.09□□□□□ -0.15
PDX1P52945 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC14.09□□□□□ -0.15
PDX1P52945 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC14.09□□□□□ -0.15
PDX1P52945 FOS-204ENST00000554617 796 ntTSL 2 BASIC14.09□□□□□ -0.15
PDX1P52945 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC14.09□□□□□ -0.15
PDX1P52945 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDX1P52945 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
PDX1P52945 AC242376.2-201ENST00000619355 883 ntBASIC14.09□□□□□ -0.15
PDX1P52945 AC133540.1-201ENST00000620845 1019 ntBASIC14.09□□□□□ -0.15
PDX1P52945 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PDX1P52945 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PDX1P52945 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDX1P52945 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.09□□□□□ -0.15
PDX1P52945 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDX1P52945 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDX1P52945 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDX1P52945 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDX1P52945 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDX1P52945 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
PDX1P52945 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PDX1P52945 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDX1P52945 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
PDX1P52945 AC007191.1-201ENST00000623179 2995 ntBASIC14.09□□□□□ -0.15
PDX1P52945 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDX1P52945 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
PDX1P52945 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PDX1P52945 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDX1P52945 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.09□□□□□ -0.15
PDX1P52945 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.08□□□□□ -0.15
PDX1P52945 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.08□□□□□ -0.15
PDX1P52945 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDX1P52945 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDX1P52945 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.08□□□□□ -0.16
PDX1P52945 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PDX1P52945 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.08□□□□□ -0.16
PDX1P52945 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
PDX1P52945 SNX18-202ENST00000343017 3140 ntBASIC14.08□□□□□ -0.16
PDX1P52945 AC139749.1-202ENST00000617529 3139 ntBASIC14.08□□□□□ -0.16
PDX1P52945 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDX1P52945 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDX1P52945 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PDX1P52945 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.08□□□□□ -0.16
PDX1P52945 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
PDX1P52945 KRT18P36-201ENST00000411618 1276 ntBASIC14.08□□□□□ -0.16
PDX1P52945 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC14.08□□□□□ -0.16
PDX1P52945 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC14.08□□□□□ -0.16
PDX1P52945 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC14.08□□□□□ -0.16
PDX1P52945 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC14.08□□□□□ -0.16
PDX1P52945 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC14.08□□□□□ -0.16
PDX1P52945 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.08□□□□□ -0.16
PDX1P52945 AC103810.10-201ENST00000606504 343 ntBASIC14.08□□□□□ -0.16
PDX1P52945 MIR6842-201ENST00000612539 65 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms