Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AF254983.2-201ENST00000612331 135 ntBASIC16.96■□□□□ 0.3
NEDD4P46934 CDK7-214ENST00000626796 358 ntTSL 5 BASIC16.96■□□□□ 0.3
NEDD4P46934 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC16.96■□□□□ 0.3
NEDD4P46934 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
NEDD4P46934 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NEDD4P46934 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
NEDD4P46934 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC16.95■□□□□ 0.3
NEDD4P46934 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
NEDD4P46934 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NEDD4P46934 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NEDD4P46934 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.95■□□□□ 0.3
NEDD4P46934 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NEDD4P46934 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC16.95■□□□□ 0.3
NEDD4P46934 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC16.95■□□□□ 0.3
NEDD4P46934 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NEDD4P46934 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC16.95■□□□□ 0.3
NEDD4P46934 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
NEDD4P46934 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
NEDD4P46934 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NEDD4P46934 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC16.95■□□□□ 0.3
NEDD4P46934 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NEDD4P46934 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NEDD4P46934 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.95■□□□□ 0.3
NEDD4P46934 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NEDD4P46934 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NEDD4P46934 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC16.95■□□□□ 0.3
NEDD4P46934 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NEDD4P46934 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NEDD4P46934 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
NEDD4P46934 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC16.95■□□□□ 0.3
NEDD4P46934 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NEDD4P46934 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NEDD4P46934 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC16.95■□□□□ 0.3
NEDD4P46934 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.95■□□□□ 0.3
NEDD4P46934 PDIA3P2-201ENST00000428073 158 ntBASIC16.95■□□□□ 0.3
NEDD4P46934 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NEDD4P46934 IGHJ2P-201ENST00000454480 60 ntBASIC16.95■□□□□ 0.3
NEDD4P46934 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NEDD4P46934 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NEDD4P46934 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.95■□□□□ 0.3
NEDD4P46934 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC16.95■□□□□ 0.3
NEDD4P46934 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NEDD4P46934 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NEDD4P46934 LINC00115-201ENST00000473798 1317 ntBASIC16.94■□□□□ 0.3
NEDD4P46934 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD4P46934 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.94■□□□□ 0.3
NEDD4P46934 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC16.94■□□□□ 0.3
NEDD4P46934 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD4P46934 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD4P46934 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD4P46934 AL133338.1-201ENST00000565695 1517 ntBASIC16.94■□□□□ 0.3
NEDD4P46934 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD4P46934 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
NEDD4P46934 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD4P46934 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD4P46934 BRD7P5-201ENST00000299197 1822 ntBASIC16.94■□□□□ 0.3
NEDD4P46934 DDC-213ENST00000617822 1809 ntTSL 3 BASIC16.94■□□□□ 0.3
NEDD4P46934 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD4P46934 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD4P46934 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD4P46934 AC090643.2-201ENST00000623442 2029 ntBASIC16.94■□□□□ 0.3
NEDD4P46934 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD4P46934 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD4P46934 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD4P46934 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD4P46934 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD4P46934 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD4P46934 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD4P46934 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD4P46934 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
NEDD4P46934 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
NEDD4P46934 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD4P46934 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD4P46934 USP17L6P-201ENST00000382470 1197 ntBASIC16.94■□□□□ 0.3
NEDD4P46934 MIR769-201ENST00000390225 118 ntBASIC16.94■□□□□ 0.3
NEDD4P46934 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD4P46934 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.94■□□□□ 0.3
NEDD4P46934 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.94■□□□□ 0.3
NEDD4P46934 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.94■□□□□ 0.3
NEDD4P46934 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC16.94■□□□□ 0.3
NEDD4P46934 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC16.94■□□□□ 0.3
NEDD4P46934 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.94■□□□□ 0.3
NEDD4P46934 MAX-218ENST00000557746 571 ntTSL 4 BASIC16.94■□□□□ 0.3
NEDD4P46934 AC140658.4-201ENST00000561990 352 ntBASIC16.94■□□□□ 0.3
NEDD4P46934 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC16.94■□□□□ 0.3
NEDD4P46934 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD4P46934 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.94■□□□□ 0.3
NEDD4P46934 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD4P46934 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC16.94■□□□□ 0.3
NEDD4P46934 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC16.94■□□□□ 0.3
NEDD4P46934 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.94■□□□□ 0.3
NEDD4P46934 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
NEDD4P46934 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NEDD4P46934 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.94■□□□□ 0.3
NEDD4P46934 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.94■□□□□ 0.3
NEDD4P46934 TCAM1P-207ENST00000485295 1537 ntBASIC16.94■□□□□ 0.3
NEDD4P46934 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NEDD4P46934 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
NEDD4P46934 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NEDD4P46934 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms