Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LTBRP36941 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LTBRP36941 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
LTBRP36941 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LTBRP36941 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.58□□□□□ -0.07
LTBRP36941 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
LTBRP36941 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.58□□□□□ -0.07
LTBRP36941 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LTBRP36941 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LTBRP36941 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
LTBRP36941 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LTBRP36941 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
LTBRP36941 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LTBRP36941 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
LTBRP36941 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
LTBRP36941 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.58□□□□□ -0.08
LTBRP36941 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LTBRP36941 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
LTBRP36941 AIG1-203ENST00000367596 559 ntTSL 2 BASIC14.58□□□□□ -0.08
LTBRP36941 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC14.58□□□□□ -0.08
LTBRP36941 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LTBRP36941 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LTBRP36941 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC14.58□□□□□ -0.08
LTBRP36941 RPL18AP16-201ENST00000424057 531 ntBASIC14.58□□□□□ -0.08
LTBRP36941 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC14.58□□□□□ -0.08
LTBRP36941 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.58□□□□□ -0.08
LTBRP36941 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC14.58□□□□□ -0.08
LTBRP36941 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC14.58□□□□□ -0.08
LTBRP36941 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC14.58□□□□□ -0.08
LTBRP36941 LY6E-215ENST00000523847 427 ntTSL 3 BASIC14.58□□□□□ -0.08
LTBRP36941 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
LTBRP36941 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC14.58□□□□□ -0.08
LTBRP36941 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC14.58□□□□□ -0.08
LTBRP36941 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.58□□□□□ -0.08
LTBRP36941 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LTBRP36941 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LTBRP36941 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LTBRP36941 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
LTBRP36941 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.58□□□□□ -0.08
LTBRP36941 AC008894.3-201ENST00000624324 3103 ntBASIC14.58□□□□□ -0.08
LTBRP36941 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LTBRP36941 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
LTBRP36941 AC015909.5-201ENST00000624336 2266 ntBASIC14.58□□□□□ -0.08
LTBRP36941 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LTBRP36941 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC14.58□□□□□ -0.08
LTBRP36941 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LTBRP36941 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LTBRP36941 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.58□□□□□ -0.08
LTBRP36941 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LTBRP36941 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LTBRP36941 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LTBRP36941 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.57□□□□□ -0.08
LTBRP36941 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LTBRP36941 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LTBRP36941 AC091951.1-201ENST00000512854 2465 ntBASIC14.57□□□□□ -0.08
LTBRP36941 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LTBRP36941 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LTBRP36941 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LTBRP36941 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LTBRP36941 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LTBRP36941 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LTBRP36941 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.57□□□□□ -0.08
LTBRP36941 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LTBRP36941 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.57□□□□□ -0.08
LTBRP36941 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LTBRP36941 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LTBRP36941 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LTBRP36941 AL354702.1-201ENST00000442006 1960 ntBASIC14.57□□□□□ -0.08
LTBRP36941 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LTBRP36941 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LTBRP36941 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LTBRP36941 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LTBRP36941 U3.5-201ENST00000363448 216 ntBASIC14.57□□□□□ -0.08
LTBRP36941 CCL19-202ENST00000378800 414 ntTSL 2 BASIC14.57□□□□□ -0.08
LTBRP36941 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LTBRP36941 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC14.57□□□□□ -0.08
LTBRP36941 FDPSP7-201ENST00000429043 1054 ntBASIC14.57□□□□□ -0.08
LTBRP36941 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC14.57□□□□□ -0.08
LTBRP36941 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC14.57□□□□□ -0.08
LTBRP36941 AC092910.2-201ENST00000491262 348 ntBASIC14.57□□□□□ -0.08
LTBRP36941 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC14.57□□□□□ -0.08
LTBRP36941 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC14.57□□□□□ -0.08
LTBRP36941 AC142086.5-202ENST00000562500 217 ntBASIC14.57□□□□□ -0.08
LTBRP36941 AC132812.1-201ENST00000583145 892 ntBASIC14.57□□□□□ -0.08
LTBRP36941 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.57□□□□□ -0.08
LTBRP36941 AC138035.3-201ENST00000622706 2791 ntBASIC14.57□□□□□ -0.08
LTBRP36941 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
LTBRP36941 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LTBRP36941 AL008638.4-201ENST00000624792 1315 ntBASIC14.57□□□□□ -0.08
LTBRP36941 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.57□□□□□ -0.08
LTBRP36941 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.57□□□□□ -0.08
LTBRP36941 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LTBRP36941 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.57□□□□□ -0.08
LTBRP36941 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LTBRP36941 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.57□□□□□ -0.08
LTBRP36941 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LTBRP36941 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
LTBRP36941 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LTBRP36941 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LTBRP36941 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms