Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LSP1P33241 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.58□□□□□ -0.08
LSP1P33241 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
LSP1P33241 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LSP1P33241 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LSP1P33241 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LSP1P33241 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LSP1P33241 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LSP1P33241 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
LSP1P33241 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LSP1P33241 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC14.57□□□□□ -0.08
LSP1P33241 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
LSP1P33241 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LSP1P33241 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LSP1P33241 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC14.57□□□□□ -0.08
LSP1P33241 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LSP1P33241 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.57□□□□□ -0.08
LSP1P33241 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.57□□□□□ -0.08
LSP1P33241 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.57□□□□□ -0.08
LSP1P33241 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LSP1P33241 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LSP1P33241 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
LSP1P33241 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC14.57□□□□□ -0.08
LSP1P33241 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LSP1P33241 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
LSP1P33241 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LSP1P33241 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
LSP1P33241 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LSP1P33241 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LSP1P33241 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
LSP1P33241 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.57□□□□□ -0.08
LSP1P33241 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.57□□□□□ -0.08
LSP1P33241 AP000347.1-202ENST00000435868 847 ntBASIC14.57□□□□□ -0.08
LSP1P33241 AC003958.1-201ENST00000435883 421 ntBASIC14.57□□□□□ -0.08
LSP1P33241 AK2P2-201ENST00000439142 405 ntBASIC14.57□□□□□ -0.08
LSP1P33241 AC026434.2-201ENST00000506094 1078 ntBASIC14.57□□□□□ -0.08
LSP1P33241 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.57□□□□□ -0.08
LSP1P33241 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.57□□□□□ -0.08
LSP1P33241 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.57□□□□□ -0.08
LSP1P33241 MIR3687-2-201ENST00000577708 61 ntBASIC14.57□□□□□ -0.08
LSP1P33241 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.57□□□□□ -0.08
LSP1P33241 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.57□□□□□ -0.08
LSP1P33241 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.57□□□□□ -0.08
LSP1P33241 MTDHP5-201ENST00000598980 586 ntBASIC14.57□□□□□ -0.08
LSP1P33241 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LSP1P33241 MIR3687-1-201ENST00000614492 61 ntBASIC14.57□□□□□ -0.08
LSP1P33241 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LSP1P33241 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LSP1P33241 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
LSP1P33241 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LSP1P33241 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LSP1P33241 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LSP1P33241 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
LSP1P33241 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LSP1P33241 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
LSP1P33241 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LSP1P33241 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LSP1P33241 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LSP1P33241 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
LSP1P33241 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LSP1P33241 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LSP1P33241 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
LSP1P33241 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC14.56□□□□□ -0.08
LSP1P33241 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
LSP1P33241 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LSP1P33241 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LSP1P33241 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LSP1P33241 NPTN-IT1-201ENST00000628401 2283 ntBASIC14.56□□□□□ -0.08
LSP1P33241 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LSP1P33241 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LSP1P33241 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LSP1P33241 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LSP1P33241 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LSP1P33241 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LSP1P33241 USP17L6P-201ENST00000382470 1197 ntBASIC14.56□□□□□ -0.08
LSP1P33241 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LSP1P33241 AC023274.1-201ENST00000418278 595 ntBASIC14.56□□□□□ -0.08
LSP1P33241 BX842568.4-201ENST00000421222 227 ntBASIC14.56□□□□□ -0.08
LSP1P33241 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.56□□□□□ -0.08
LSP1P33241 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
LSP1P33241 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.56□□□□□ -0.08
LSP1P33241 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.56□□□□□ -0.08
LSP1P33241 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.56□□□□□ -0.08
LSP1P33241 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.56□□□□□ -0.08
LSP1P33241 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.56□□□□□ -0.08
LSP1P33241 AC138761.1-201ENST00000584393 385 ntBASIC14.56□□□□□ -0.08
LSP1P33241 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LSP1P33241 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
LSP1P33241 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC14.56□□□□□ -0.08
LSP1P33241 AC007967.4-201ENST00000614700 386 ntBASIC14.56□□□□□ -0.08
LSP1P33241 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.56□□□□□ -0.08
LSP1P33241 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.56□□□□□ -0.08
LSP1P33241 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
LSP1P33241 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LSP1P33241 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
LSP1P33241 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LSP1P33241 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LSP1P33241 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LSP1P33241 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LSP1P33241 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms