Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTX3P26022 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTX3P26022 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTX3P26022 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTX3P26022 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTX3P26022 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTX3P26022 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
PTX3P26022 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTX3P26022 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
PTX3P26022 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
PTX3P26022 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTX3P26022 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PTX3P26022 ANKRD19P-201ENST00000338192 862 ntBASIC13.94□□□□□ -0.18
PTX3P26022 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PTX3P26022 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
PTX3P26022 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.94□□□□□ -0.18
PTX3P26022 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.94□□□□□ -0.18
PTX3P26022 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.94□□□□□ -0.18
PTX3P26022 YBX1P6-201ENST00000442962 1002 ntBASIC13.94□□□□□ -0.18
PTX3P26022 E2F3P2-201ENST00000447755 1422 ntBASIC13.94□□□□□ -0.18
PTX3P26022 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.94□□□□□ -0.18
PTX3P26022 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PTX3P26022 KRT8P24-201ENST00000560290 1559 ntBASIC13.94□□□□□ -0.18
PTX3P26022 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.94□□□□□ -0.18
PTX3P26022 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
PTX3P26022 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
PTX3P26022 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.94□□□□□ -0.18
PTX3P26022 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.94□□□□□ -0.18
PTX3P26022 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTX3P26022 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
PTX3P26022 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.94□□□□□ -0.18
PTX3P26022 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PTX3P26022 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PTX3P26022 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTX3P26022 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
PTX3P26022 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
PTX3P26022 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.94□□□□□ -0.18
PTX3P26022 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTX3P26022 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
PTX3P26022 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
PTX3P26022 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTX3P26022 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PTX3P26022 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTX3P26022 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
PTX3P26022 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
PTX3P26022 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
PTX3P26022 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.94□□□□□ -0.18
PTX3P26022 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.93□□□□□ -0.18
PTX3P26022 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
PTX3P26022 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
PTX3P26022 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.93□□□□□ -0.18
PTX3P26022 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTX3P26022 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.93□□□□□ -0.18
PTX3P26022 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.93□□□□□ -0.18
PTX3P26022 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
PTX3P26022 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTX3P26022 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTX3P26022 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PTX3P26022 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
PTX3P26022 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTX3P26022 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
PTX3P26022 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTX3P26022 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.93□□□□□ -0.18
PTX3P26022 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.93□□□□□ -0.18
PTX3P26022 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
PTX3P26022 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTX3P26022 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTX3P26022 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTX3P26022 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PTX3P26022 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
PTX3P26022 HLA-V-201ENST00000429037 534 ntBASIC13.93□□□□□ -0.18
PTX3P26022 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PTX3P26022 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.93□□□□□ -0.18
PTX3P26022 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.93□□□□□ -0.18
PTX3P26022 TMEM198B-204ENST00000484016 896 ntBASIC13.93□□□□□ -0.18
PTX3P26022 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.93□□□□□ -0.18
PTX3P26022 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTX3P26022 SNX29P1-201ENST00000548357 1007 ntBASIC13.93□□□□□ -0.18
PTX3P26022 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.93□□□□□ -0.18
PTX3P26022 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.93□□□□□ -0.18
PTX3P26022 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.93□□□□□ -0.18
PTX3P26022 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTX3P26022 MIR6720-201ENST00000611664 98 ntBASIC13.93□□□□□ -0.18
PTX3P26022 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.93□□□□□ -0.18
PTX3P26022 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTX3P26022 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.93□□□□□ -0.18
PTX3P26022 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.93□□□□□ -0.18
PTX3P26022 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
PTX3P26022 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
PTX3P26022 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.93□□□□□ -0.18
PTX3P26022 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PTX3P26022 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
PTX3P26022 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTX3P26022 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTX3P26022 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.93□□□□□ -0.18
PTX3P26022 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
PTX3P26022 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
PTX3P26022 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTX3P26022 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
PTX3P26022 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 175.8 ms