Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN1P18031 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN1P18031 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN1P18031 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PTPN1P18031 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN1P18031 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN1P18031 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PTPN1P18031 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN1P18031 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN1P18031 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.3■□□□□ 0.04
PTPN1P18031 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN1P18031 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN1P18031 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN1P18031 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN1P18031 OR2I1P-210ENST00000642037 4691 ntBASIC15.3■□□□□ 0.04
PTPN1P18031 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN1P18031 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN1P18031 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN1P18031 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN1P18031 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN1P18031 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC15.3■□□□□ 0.04
PTPN1P18031 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN1P18031 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.3■□□□□ 0.04
PTPN1P18031 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN1P18031 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.3■□□□□ 0.04
PTPN1P18031 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN1P18031 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN1P18031 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PTPN1P18031 FRMPD2B-201ENST00000431305 1347 ntBASIC15.3■□□□□ 0.04
PTPN1P18031 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC15.3■□□□□ 0.04
PTPN1P18031 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC15.3■□□□□ 0.04
PTPN1P18031 AC073150.1-201ENST00000450406 1084 ntBASIC15.3■□□□□ 0.04
PTPN1P18031 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN1P18031 PFN2-206ENST00000461930 606 ntTSL 4 BASIC15.3■□□□□ 0.04
PTPN1P18031 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN1P18031 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PTPN1P18031 RHEB-207ENST00000496004 744 ntTSL 2 BASIC15.3■□□□□ 0.04
PTPN1P18031 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.3■□□□□ 0.04
PTPN1P18031 NUP210P1-202ENST00000504322 710 ntBASIC15.3■□□□□ 0.04
PTPN1P18031 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.3■□□□□ 0.04
PTPN1P18031 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.3■□□□□ 0.04
PTPN1P18031 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC15.3■□□□□ 0.04
PTPN1P18031 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC15.3■□□□□ 0.04
PTPN1P18031 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PTPN1P18031 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC15.3■□□□□ 0.04
PTPN1P18031 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.3■□□□□ 0.04
PTPN1P18031 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.3■□□□□ 0.04
PTPN1P18031 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.3■□□□□ 0.04
PTPN1P18031 CHMP4BP1-201ENST00000556017 588 ntBASIC15.3■□□□□ 0.04
PTPN1P18031 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC15.3■□□□□ 0.04
PTPN1P18031 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.3■□□□□ 0.04
PTPN1P18031 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC15.3■□□□□ 0.04
PTPN1P18031 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC15.3■□□□□ 0.04
PTPN1P18031 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC15.3■□□□□ 0.04
PTPN1P18031 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN1P18031 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN1P18031 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN1P18031 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PTPN1P18031 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN1P18031 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.29■□□□□ 0.04
PTPN1P18031 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.29■□□□□ 0.04
PTPN1P18031 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.29■□□□□ 0.04
PTPN1P18031 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN1P18031 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.29■□□□□ 0.04
PTPN1P18031 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.29■□□□□ 0.04
PTPN1P18031 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN1P18031 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
PTPN1P18031 AC015909.3-201ENST00000572855 1794 ntBASIC15.29■□□□□ 0.04
PTPN1P18031 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PTPN1P18031 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN1P18031 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC15.29■□□□□ 0.04
PTPN1P18031 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC15.29■□□□□ 0.04
PTPN1P18031 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PTPN1P18031 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN1P18031 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.29■□□□□ 0.04
PTPN1P18031 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN1P18031 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN1P18031 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
PTPN1P18031 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PTPN1P18031 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN1P18031 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN1P18031 RNA5SP359-201ENST00000364838 113 ntBASIC15.29■□□□□ 0.04
PTPN1P18031 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC15.29■□□□□ 0.04
PTPN1P18031 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC15.29■□□□□ 0.04
PTPN1P18031 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC15.29■□□□□ 0.04
PTPN1P18031 PDIA3P2-201ENST00000428073 158 ntBASIC15.29■□□□□ 0.04
PTPN1P18031 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC15.29■□□□□ 0.04
PTPN1P18031 AC245884.6-201ENST00000515672 1067 ntBASIC15.29■□□□□ 0.04
PTPN1P18031 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC15.29■□□□□ 0.04
PTPN1P18031 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.29■□□□□ 0.04
PTPN1P18031 NAT9-211ENST00000580632 799 ntTSL 3 BASIC15.29■□□□□ 0.04
PTPN1P18031 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC15.29■□□□□ 0.04
PTPN1P18031 AC020922.3-201ENST00000595064 547 ntBASIC15.29■□□□□ 0.04
PTPN1P18031 AC091812.3-201ENST00000621362 345 ntBASIC15.29■□□□□ 0.04
PTPN1P18031 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PTPN1P18031 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.29■□□□□ 0.04
PTPN1P18031 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN1P18031 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.29■□□□□ 0.04
PTPN1P18031 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.29■□□□□ 0.04
PTPN1P18031 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms