Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL2P13500 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL2P13500 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL2P13500 MBLAC2-202ENST00000514906 1936 ntBASIC12.68□□□□□ -0.38
CCL2P13500 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.68□□□□□ -0.38
CCL2P13500 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCL2P13500 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL2P13500 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL2P13500 PID1-202ENST00000392054 2745 ntTSL 2 BASIC12.68□□□□□ -0.38
CCL2P13500 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL2P13500 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL2P13500 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL2P13500 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL2P13500 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CCL2P13500 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL2P13500 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.67□□□□□ -0.38
CCL2P13500 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.67□□□□□ -0.38
CCL2P13500 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL2P13500 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.67□□□□□ -0.38
CCL2P13500 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL2P13500 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL2P13500 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL2P13500 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
CCL2P13500 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL2P13500 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.67□□□□□ -0.38
CCL2P13500 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.67□□□□□ -0.38
CCL2P13500 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL2P13500 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.67□□□□□ -0.38
CCL2P13500 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
CCL2P13500 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL2P13500 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL2P13500 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CCL2P13500 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.67□□□□□ -0.38
CCL2P13500 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
CCL2P13500 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.67□□□□□ -0.38
CCL2P13500 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CCL2P13500 RPS3-201ENST00000278572 907 ntTSL 3 BASIC12.67□□□□□ -0.38
CCL2P13500 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL2P13500 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL2P13500 KRTAP10-13P-201ENST00000412914 571 ntBASIC12.67□□□□□ -0.38
CCL2P13500 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCL2P13500 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC12.67□□□□□ -0.38
CCL2P13500 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC12.67□□□□□ -0.38
CCL2P13500 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC12.67□□□□□ -0.38
CCL2P13500 RBM8B-201ENST00000555532 525 ntBASIC12.67□□□□□ -0.38
CCL2P13500 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCL2P13500 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.67□□□□□ -0.38
CCL2P13500 Z98259.2-201ENST00000641583 609 ntBASIC12.67□□□□□ -0.38
CCL2P13500 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.67□□□□□ -0.38
CCL2P13500 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.67□□□□□ -0.38
CCL2P13500 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL2P13500 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCL2P13500 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.67□□□□□ -0.38
CCL2P13500 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.67□□□□□ -0.38
CCL2P13500 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.67□□□□□ -0.38
CCL2P13500 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCL2P13500 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCL2P13500 KRT8P29-201ENST00000420409 1371 ntBASIC12.67□□□□□ -0.38
CCL2P13500 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
CCL2P13500 AC090505.1-201ENST00000430515 1834 ntBASIC12.67□□□□□ -0.38
CCL2P13500 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CCL2P13500 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.67□□□□□ -0.38
CCL2P13500 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL2P13500 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.66□□□□□ -0.38
CCL2P13500 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL2P13500 HSPA8P5-201ENST00000456928 2069 ntBASIC12.66□□□□□ -0.38
CCL2P13500 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
CCL2P13500 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCL2P13500 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCL2P13500 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.66□□□□□ -0.38
CCL2P13500 AC152010.1-201ENST00000415779 2006 ntBASIC12.66□□□□□ -0.38
CCL2P13500 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CCL2P13500 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL2P13500 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCL2P13500 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCL2P13500 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CCL2P13500 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CCL2P13500 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCL2P13500 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL2P13500 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC12.66□□□□□ -0.38
CCL2P13500 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL2P13500 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCL2P13500 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC12.66□□□□□ -0.38
CCL2P13500 PFN1P12-201ENST00000455938 534 ntBASIC12.66□□□□□ -0.38
CCL2P13500 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC12.66□□□□□ -0.38
CCL2P13500 RPL18P13-201ENST00000478088 569 ntBASIC12.66□□□□□ -0.38
CCL2P13500 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC12.66□□□□□ -0.38
CCL2P13500 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL2P13500 AC092658.1-201ENST00000505836 891 ntBASIC12.66□□□□□ -0.38
CCL2P13500 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC12.66□□□□□ -0.38
CCL2P13500 FAM8A2P-201ENST00000528813 1142 ntBASIC12.66□□□□□ -0.38
CCL2P13500 AC027237.1-201ENST00000560942 655 ntBASIC12.66□□□□□ -0.38
CCL2P13500 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.66□□□□□ -0.38
CCL2P13500 AC008805.1-201ENST00000590892 364 ntBASIC12.66□□□□□ -0.38
CCL2P13500 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CCL2P13500 AC009884.2-201ENST00000603110 324 ntBASIC12.66□□□□□ -0.38
CCL2P13500 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
CCL2P13500 RPL35-206ENST00000629845 340 ntTSL 5 BASIC12.66□□□□□ -0.38
CCL2P13500 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL2P13500 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms