Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 AC140479.7-201ENST00000636301 2332 ntBASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 MBP-201ENST00000354542 575 ntTSL 2 BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 AL592076.1-201ENST00000424448 303 ntBASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 NEU3-205ENST00000531619 582 ntTSL 5 BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 CFL1-214ENST00000534769 758 ntTSL 2 BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 PHBP15-201ENST00000574228 665 ntBASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 MEG3_2.1-201ENST00000611456 105 ntBASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.67□□□□□ -0.22
RAB40ALP0C0E4 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 KHSRPP1-201ENST00000427983 1768 ntBASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 OR2R1P-201ENST00000441404 914 ntBASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 TPM1-223ENST00000560445 485 ntTSL 3 BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms