Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 AL157996.1-201ENST00000624684 2299 ntBASIC14.67□□□□□ -0.06
HLA-DQB2P05538 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DQB2P05538 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 AC005840.4-201ENST00000541242 2494 ntBASIC14.66□□□□□ -0.06
HLA-DQB2P05538 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 USP17L6P-201ENST00000382470 1197 ntBASIC14.66□□□□□ -0.06
HLA-DQB2P05538 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 AC126915.1-201ENST00000522847 1038 ntBASIC14.66□□□□□ -0.06
HLA-DQB2P05538 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 SNORD3B-2-202ENST00000571722 791 ntBASIC14.66□□□□□ -0.06
HLA-DQB2P05538 RN7SL163P-201ENST00000583100 276 ntBASIC14.66□□□□□ -0.06
HLA-DQB2P05538 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.66□□□□□ -0.06
HLA-DQB2P05538 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.65□□□□□ -0.06
HLA-DQB2P05538 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DQB2P05538 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DQB2P05538 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DQB2P05538 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DQB2P05538 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-DQB2P05538 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DQB2P05538 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DQB2P05538 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DQB2P05538 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DQB2P05538 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DQB2P05538 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DQB2P05538 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DQB2P05538 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DQB2P05538 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
HLA-DQB2P05538 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.65□□□□□ -0.06
HLA-DQB2P05538 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DQB2P05538 PFN1P12-201ENST00000455938 534 ntBASIC14.65□□□□□ -0.06
HLA-DQB2P05538 AC106794.1-201ENST00000506935 792 ntBASIC14.65□□□□□ -0.06
HLA-DQB2P05538 AC044849.1-201ENST00000519737 1188 ntBASIC14.65□□□□□ -0.06
HLA-DQB2P05538 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-DQB2P05538 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.65□□□□□ -0.06
HLA-DQB2P05538 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-DQB2P05538 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-DQB2P05538 RN7SL219P-201ENST00000582872 296 ntBASIC14.65□□□□□ -0.06
HLA-DQB2P05538 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.65□□□□□ -0.06
HLA-DQB2P05538 AL118558.3-201ENST00000607414 1079 ntBASIC14.65□□□□□ -0.06
HLA-DQB2P05538 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
HLA-DQB2P05538 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DQB2P05538 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DQB2P05538 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DQB2P05538 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DQB2P05538 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DQB2P05538 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DQB2P05538 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DQB2P05538 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.65□□□□□ -0.06
HLA-DQB2P05538 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DQB2P05538 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-DQB2P05538 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms