Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
HLA-DQB1P01920 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 AC109322.1-201ENST00000524499 1264 ntBASIC12.53□□□□□ -0.4
HLA-DQB1P01920 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 AL596442.2-201ENST00000610240 980 ntBASIC12.53□□□□□ -0.4
HLA-DQB1P01920 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 AP001002.3-201ENST00000623482 206 ntBASIC12.53□□□□□ -0.4
HLA-DQB1P01920 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DQB1P01920 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
HLA-DQB1P01920 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
HLA-DQB1P01920 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
HLA-DQB1P01920 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
HLA-DQB1P01920 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
HLA-DQB1P01920 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
HLA-DQB1P01920 AC004899.2-201ENST00000622993 3860 ntBASIC12.52□□□□□ -0.4
HLA-DQB1P01920 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.52□□□□□ -0.4
HLA-DQB1P01920 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC12.52□□□□□ -0.4
HLA-DQB1P01920 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
HLA-DQB1P01920 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DQB1P01920 AC108024.1-201ENST00000626286 1721 ntBASIC12.52□□□□□ -0.41
HLA-DQB1P01920 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DQB1P01920 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DQB1P01920 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DQB1P01920 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12.52□□□□□ -0.41
HLA-DQB1P01920 USP17L6P-201ENST00000382470 1197 ntBASIC12.52□□□□□ -0.41
HLA-DQB1P01920 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
HLA-DQB1P01920 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
HLA-DQB1P01920 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DQB1P01920 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.52□□□□□ -0.41
HLA-DQB1P01920 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC12.52□□□□□ -0.41
HLA-DQB1P01920 GCOM2-201ENST00000509133 1104 ntBASIC12.52□□□□□ -0.41
HLA-DQB1P01920 AC069120.2-201ENST00000524091 540 ntBASIC12.52□□□□□ -0.41
HLA-DQB1P01920 AC027369.6-201ENST00000525520 931 ntBASIC12.52□□□□□ -0.41
HLA-DQB1P01920 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.52□□□□□ -0.41
HLA-DQB1P01920 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
HLA-DQB1P01920 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.52□□□□□ -0.41
HLA-DQB1P01920 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.52□□□□□ -0.41
HLA-DQB1P01920 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC12.52□□□□□ -0.41
HLA-DQB1P01920 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.52□□□□□ -0.41
HLA-DQB1P01920 TEX48-202ENST00000612244 662 ntTSL 3 BASIC12.52□□□□□ -0.41
HLA-DQB1P01920 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC12.52□□□□□ -0.41
HLA-DQB1P01920 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC12.52□□□□□ -0.41
HLA-DQB1P01920 AL603764.1-201ENST00000636452 321 ntBASIC12.52□□□□□ -0.41
HLA-DQB1P01920 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12.52□□□□□ -0.41
HLA-DQB1P01920 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DQB1P01920 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DQB1P01920 AL138725.1-201ENST00000407347 1314 ntBASIC12.52□□□□□ -0.41
HLA-DQB1P01920 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms