Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAPGEF3O95398 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAPGEF3O95398 AC008620.2-201ENST00000510294 1569 ntBASIC21.06■□□□□ 0.96
RAPGEF3O95398 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAPGEF3O95398 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC21.06■□□□□ 0.96
RAPGEF3O95398 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAPGEF3O95398 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAPGEF3O95398 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
RAPGEF3O95398 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAPGEF3O95398 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC21.06■□□□□ 0.96
RAPGEF3O95398 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAPGEF3O95398 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAPGEF3O95398 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAPGEF3O95398 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC21.06■□□□□ 0.96
RAPGEF3O95398 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC21.06■□□□□ 0.96
RAPGEF3O95398 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC21.06■□□□□ 0.96
RAPGEF3O95398 AC010202.1-201ENST00000551181 405 ntBASIC21.06■□□□□ 0.96
RAPGEF3O95398 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC21.06■□□□□ 0.96
RAPGEF3O95398 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RAPGEF3O95398 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC21.06■□□□□ 0.96
RAPGEF3O95398 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC21.06■□□□□ 0.96
RAPGEF3O95398 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC21.06■□□□□ 0.96
RAPGEF3O95398 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC21.06■□□□□ 0.96
RAPGEF3O95398 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAPGEF3O95398 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAPGEF3O95398 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC21.06■□□□□ 0.96
RAPGEF3O95398 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
RAPGEF3O95398 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAPGEF3O95398 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAPGEF3O95398 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC21.06■□□□□ 0.96
RAPGEF3O95398 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAPGEF3O95398 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC21.06■□□□□ 0.96
RAPGEF3O95398 HLA-DQB2-231ENST00000435145 2026 ntBASIC21.05■□□□□ 0.96
RAPGEF3O95398 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RAPGEF3O95398 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAPGEF3O95398 SIGLEC20P-201ENST00000595243 1311 ntBASIC21.05■□□□□ 0.96
RAPGEF3O95398 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RAPGEF3O95398 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RAPGEF3O95398 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RAPGEF3O95398 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAPGEF3O95398 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
RAPGEF3O95398 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC21.05■□□□□ 0.96
RAPGEF3O95398 ASS1P1-201ENST00000402854 1237 ntBASIC21.05■□□□□ 0.96
RAPGEF3O95398 TPT1P9-201ENST00000413759 514 ntBASIC21.05■□□□□ 0.96
RAPGEF3O95398 AC010086.2-201ENST00000428616 226 ntBASIC21.05■□□□□ 0.96
RAPGEF3O95398 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC21.05■□□□□ 0.96
RAPGEF3O95398 RPL18AP15-201ENST00000430258 517 ntBASIC21.05■□□□□ 0.96
RAPGEF3O95398 CDKN2A-AS1-201ENST00000441769 823 ntBASIC21.05■□□□□ 0.96
RAPGEF3O95398 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC21.05■□□□□ 0.96
RAPGEF3O95398 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC21.05■□□□□ 0.96
RAPGEF3O95398 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC21.05■□□□□ 0.96
RAPGEF3O95398 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC21.05■□□□□ 0.96
RAPGEF3O95398 FAM187B2P-201ENST00000577135 713 ntBASIC21.05■□□□□ 0.96
RAPGEF3O95398 CCND3P2-201ENST00000579393 537 ntBASIC21.05■□□□□ 0.96
RAPGEF3O95398 AC087072.1-201ENST00000603727 421 ntBASIC21.05■□□□□ 0.96
RAPGEF3O95398 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC21.05■□□□□ 0.96
RAPGEF3O95398 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC21.05■□□□□ 0.96
RAPGEF3O95398 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
RAPGEF3O95398 GUCY2EP-203ENST00000531117 1918 ntBASIC21.05■□□□□ 0.96
RAPGEF3O95398 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
RAPGEF3O95398 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC21.05■□□□□ 0.96
RAPGEF3O95398 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAPGEF3O95398 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAPGEF3O95398 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
RAPGEF3O95398 AC103702.1-201ENST00000548801 2630 ntBASIC21.05■□□□□ 0.96
RAPGEF3O95398 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAPGEF3O95398 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RAPGEF3O95398 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RAPGEF3O95398 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RAPGEF3O95398 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC21.04■□□□□ 0.96
RAPGEF3O95398 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC21.04■□□□□ 0.96
RAPGEF3O95398 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RAPGEF3O95398 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAPGEF3O95398 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAPGEF3O95398 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAPGEF3O95398 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAPGEF3O95398 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAPGEF3O95398 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
RAPGEF3O95398 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAPGEF3O95398 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAPGEF3O95398 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAPGEF3O95398 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC21.04■□□□□ 0.96
RAPGEF3O95398 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC21.04■□□□□ 0.96
RAPGEF3O95398 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RAPGEF3O95398 AC103592.1-201ENST00000394513 664 ntBASIC21.04■□□□□ 0.96
RAPGEF3O95398 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAPGEF3O95398 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC21.04■□□□□ 0.96
RAPGEF3O95398 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RAPGEF3O95398 RPL29P2-201ENST00000488409 460 ntBASIC21.04■□□□□ 0.96
RAPGEF3O95398 CD81-209ENST00000492627 886 ntTSL 3 BASIC21.04■□□□□ 0.96
RAPGEF3O95398 AC233724.9-201ENST00000511694 407 ntBASIC21.04■□□□□ 0.96
RAPGEF3O95398 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC21.04■□□□□ 0.96
RAPGEF3O95398 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC21.04■□□□□ 0.96
RAPGEF3O95398 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC21.04■□□□□ 0.96
RAPGEF3O95398 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RAPGEF3O95398 OR3A1-202ENST00000615105 966 ntBASIC21.04■□□□□ 0.96
RAPGEF3O95398 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC21.04■□□□□ 0.96
RAPGEF3O95398 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC21.04■□□□□ 0.96
RAPGEF3O95398 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RAPGEF3O95398 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms