Protein–RNA interactions for Protein: O60682

MSC, Musculin, humanhuman

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSCO60682 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MSCO60682 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
MSCO60682 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.1■□□□□ 0.17
MSCO60682 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MSCO60682 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.1■□□□□ 0.17
MSCO60682 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
MSCO60682 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
MSCO60682 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
MSCO60682 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
MSCO60682 NME4-203ENST00000397722 1232 ntTSL 2 BASIC16.1■□□□□ 0.17
MSCO60682 MIR1301-201ENST00000408518 82 ntBASIC16.1■□□□□ 0.17
MSCO60682 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC16.1■□□□□ 0.17
MSCO60682 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
MSCO60682 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC16.1■□□□□ 0.17
MSCO60682 AC008026.2-201ENST00000495438 348 ntBASIC16.1■□□□□ 0.17
MSCO60682 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC16.1■□□□□ 0.17
MSCO60682 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC16.1■□□□□ 0.17
MSCO60682 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC16.1■□□□□ 0.17
MSCO60682 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC16.1■□□□□ 0.17
MSCO60682 NDUFB10P1-201ENST00000567319 521 ntBASIC16.1■□□□□ 0.17
MSCO60682 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC16.1■□□□□ 0.17
MSCO60682 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC16.1■□□□□ 0.17
MSCO60682 AC006548.2-201ENST00000605217 529 ntBASIC16.1■□□□□ 0.17
MSCO60682 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC16.1■□□□□ 0.17
MSCO60682 AC010976.2-201ENST00000609697 852 ntBASIC16.1■□□□□ 0.17
MSCO60682 AC006483.2-201ENST00000609813 515 ntBASIC16.1■□□□□ 0.17
MSCO60682 AL118522.1-201ENST00000611368 560 ntBASIC16.1■□□□□ 0.17
MSCO60682 HMGB1P24-201ENST00000611897 328 ntBASIC16.1■□□□□ 0.17
MSCO60682 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
MSCO60682 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MSCO60682 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MSCO60682 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MSCO60682 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC16.1■□□□□ 0.17
MSCO60682 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.1■□□□□ 0.17
MSCO60682 ZNF436-AS1-201ENST00000335648 2547 ntBASIC16.1■□□□□ 0.17
MSCO60682 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.1■□□□□ 0.17
MSCO60682 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MSCO60682 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.1■□□□□ 0.17
MSCO60682 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.1■□□□□ 0.17
MSCO60682 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC16.1■□□□□ 0.17
MSCO60682 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MSCO60682 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MSCO60682 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
MSCO60682 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
MSCO60682 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MSCO60682 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.09■□□□□ 0.17
MSCO60682 AC015688.4-201ENST00000580780 1647 ntBASIC16.09■□□□□ 0.17
MSCO60682 FER1L4-210ENST00000615531 5998 ntBASIC16.09■□□□□ 0.17
MSCO60682 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MSCO60682 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MSCO60682 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.09■□□□□ 0.17
MSCO60682 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
MSCO60682 SURF4-203ENST00000371991 715 ntTSL 3 BASIC16.09■□□□□ 0.17
MSCO60682 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC16.09■□□□□ 0.17
MSCO60682 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC16.09■□□□□ 0.17
MSCO60682 PPP1R2P4-201ENST00000424051 595 ntBASIC16.09■□□□□ 0.17
MSCO60682 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC16.09■□□□□ 0.17
MSCO60682 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MSCO60682 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
MSCO60682 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC16.09■□□□□ 0.17
MSCO60682 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC16.09■□□□□ 0.17
MSCO60682 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC16.09■□□□□ 0.17
MSCO60682 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MSCO60682 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.09■□□□□ 0.17
MSCO60682 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
MSCO60682 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MSCO60682 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
MSCO60682 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
MSCO60682 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
MSCO60682 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.08■□□□□ 0.17
MSCO60682 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
MSCO60682 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.08■□□□□ 0.17
MSCO60682 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.08■□□□□ 0.17
MSCO60682 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MSCO60682 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
MSCO60682 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MSCO60682 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
MSCO60682 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
MSCO60682 RNVU1-8-201ENST00000364272 125 ntBASIC16.08■□□□□ 0.16
MSCO60682 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MSCO60682 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC16.08■□□□□ 0.16
MSCO60682 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC16.08■□□□□ 0.16
MSCO60682 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC16.08■□□□□ 0.16
MSCO60682 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC16.08■□□□□ 0.16
MSCO60682 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC16.08■□□□□ 0.16
MSCO60682 SNORD3B-1-201ENST00000577988 758 ntBASIC16.08■□□□□ 0.16
MSCO60682 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MSCO60682 AC012073.1-201ENST00000606114 1108 ntBASIC16.08■□□□□ 0.16
MSCO60682 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC16.08■□□□□ 0.16
MSCO60682 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
MSCO60682 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MSCO60682 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MSCO60682 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
MSCO60682 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
MSCO60682 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC16.08■□□□□ 0.16
MSCO60682 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.08■□□□□ 0.16
MSCO60682 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
MSCO60682 LAP3P2-201ENST00000454686 1454 ntBASIC16.08■□□□□ 0.16
MSCO60682 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
MSCO60682 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms