Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.91□□□□□ -0.18
PDLIM1O00151 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.91□□□□□ -0.18
PDLIM1O00151 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.91□□□□□ -0.18
PDLIM1O00151 DOC2GP-202ENST00000514950 1163 ntBASIC13.91□□□□□ -0.18
PDLIM1O00151 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.91□□□□□ -0.18
PDLIM1O00151 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.91□□□□□ -0.18
PDLIM1O00151 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
PDLIM1O00151 AC138761.1-201ENST00000584393 385 ntBASIC13.91□□□□□ -0.18
PDLIM1O00151 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
PDLIM1O00151 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM1O00151 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.91□□□□□ -0.18
PDLIM1O00151 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM1O00151 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM1O00151 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
PDLIM1O00151 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM1O00151 AC102953.2-201ENST00000609755 3026 ntBASIC13.91□□□□□ -0.18
PDLIM1O00151 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM1O00151 AC011498.7-201ENST00000624986 2027 ntBASIC13.91□□□□□ -0.18
PDLIM1O00151 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM1O00151 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM1O00151 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
PDLIM1O00151 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
PDLIM1O00151 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM1O00151 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM1O00151 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDLIM1O00151 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM1O00151 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.9□□□□□ -0.18
PDLIM1O00151 TP53TG5-201ENST00000372726 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM1O00151 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM1O00151 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM1O00151 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM1O00151 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC13.9□□□□□ -0.18
PDLIM1O00151 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.9□□□□□ -0.18
PDLIM1O00151 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM1O00151 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM1O00151 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.9□□□□□ -0.18
PDLIM1O00151 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.9□□□□□ -0.18
PDLIM1O00151 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.9□□□□□ -0.18
PDLIM1O00151 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM1O00151 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM1O00151 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM1O00151 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC13.9□□□□□ -0.18
PDLIM1O00151 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC13.9□□□□□ -0.18
PDLIM1O00151 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM1O00151 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM1O00151 TOMM22P5-201ENST00000416399 439 ntBASIC13.9□□□□□ -0.18
PDLIM1O00151 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.9□□□□□ -0.18
PDLIM1O00151 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.9□□□□□ -0.18
PDLIM1O00151 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.9□□□□□ -0.18
PDLIM1O00151 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.9□□□□□ -0.18
PDLIM1O00151 AL589987.1-201ENST00000453380 819 ntBASIC13.9□□□□□ -0.18
PDLIM1O00151 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.9□□□□□ -0.18
PDLIM1O00151 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.9□□□□□ -0.18
PDLIM1O00151 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.9□□□□□ -0.18
PDLIM1O00151 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.9□□□□□ -0.18
PDLIM1O00151 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.9□□□□□ -0.18
PDLIM1O00151 AL391069.4-201ENST00000609583 481 ntBASIC13.9□□□□□ -0.18
PDLIM1O00151 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM1O00151 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.9□□□□□ -0.18
PDLIM1O00151 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM1O00151 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM1O00151 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM1O00151 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
PDLIM1O00151 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
PDLIM1O00151 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
PDLIM1O00151 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
PDLIM1O00151 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM1O00151 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM1O00151 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM1O00151 SUPT20HL1-201ENST00000436466 2618 ntBASIC13.9□□□□□ -0.18
PDLIM1O00151 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.9□□□□□ -0.18
PDLIM1O00151 MYADML-201ENST00000474610 2147 ntBASIC13.9□□□□□ -0.18
PDLIM1O00151 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.9□□□□□ -0.18
PDLIM1O00151 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM1O00151 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM1O00151 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PDLIM1O00151 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
PDLIM1O00151 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
PDLIM1O00151 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
PDLIM1O00151 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
PDLIM1O00151 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDLIM1O00151 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PDLIM1O00151 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDLIM1O00151 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDLIM1O00151 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDLIM1O00151 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDLIM1O00151 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDLIM1O00151 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDLIM1O00151 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
PDLIM1O00151 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.89□□□□□ -0.19
PDLIM1O00151 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDLIM1O00151 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDLIM1O00151 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
PDLIM1O00151 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
PDLIM1O00151 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDLIM1O00151 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDLIM1O00151 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
PDLIM1O00151 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
PDLIM1O00151 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PDLIM1O00151 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms